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(-) Description

Title :  CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF A POSSIBLE ATP-BINDING PROTEIN FROM METHANOCALDOCOCCUS JANNASCHII DSM 2661
 
Authors :  K. Tan, C. Hatzos, S. Moy, A. Joachimiak, Midwest Center For Structu Genomics (Mcsg)
Date :  04 Dec 07  (Deposition) - 18 Dec 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym./Biol. Unit :  A
Keywords :  Apc87992. 1, Methanocaldococcus Jannaschii Dsm 2661, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Atp-Binding, Nucleotide-Binding, Nucleotide Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Tan, C. Hatzos, S. Moy, A. Joachimiak
The Structure Of The C-Terminal Domain Of A Possible Atp-Binding Protein From Methanocaldococcus Jannaschii Dsm 2661.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED ATP-BINDING PROTEIN MJ1010
    Atcc: 43067
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: MJ1010
    Organism Scientific: METHANOCALDOCOCCUS JANNASCHII DSM 2661
    Organism Taxid: 243232
    Strain: DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1FMT1Ligand/IonFORMIC ACID
2MSE1Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:54 , GLU A:56 , ILE A:57 , GLU A:58 , LYS A:61BINDING SITE FOR RESIDUE FMT A 101

(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:103
 aligned with Y1010_METJA | Q58416 from UniProtKB/Swiss-Prot  Length:377

    Alignment length:103
                                   284       294       304       314       324       334       344       354       364       374   
          Y1010_METJA   275 HKNLKDVLNILLMDEISKLKDFLSNLDYIKPKVNIEEEIIEIRKEDIINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTLKPQSFLVWNAIKRVL 377
               SCOP domains ------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3bjoA00 A:-2-100 'winged helix' repressor DNA binding domain                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhh......eeee..eeee.hhhhhhhhhhhhhh...ee.hhhhhhhhhhhhhh..eeee....eeee.hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 3bjo A  -2 SNALKDVLNILLmDEISKLKDFLSNLDYIKPKVNIEEEIIEIRKEDIINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTLKPQSFLVWNAIKRVL 100
                                     7  |     17        27        37        47        57        67        77        87        97   
                                       10-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3BJO)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Y1010_METJA | Q58416)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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