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(-) Description

Authors :  A. Rohaim, M. Kawasaki, R. Kato, I. Dikic, S. Wakatsuki
Date :  01 Apr 11  (Deposition) - 25 Jan 12  (Release) - 25 Apr 12  (Revision)
Resolution :  2.19
Chains :  Asym./Biol. Unit :  A
Keywords :  Nf Kappa B Signaling, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
Reference :  A. Rohaim, M. Kawasaki, R. Kato, I. Dikic, S. Wakatsuki
Structure Of A Compact Conformation Of Linear Diubiquitin
Acta Crystallogr. , Sect. D V. 68 102 2012
PubMed-ID: 22281738  |  Reference-DOI: 10.1107/S0907444911051195

(-) Compounds

Molecule 1 - UBIQUITIN
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX-4T-1
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneRPS27A, UBA80, UBCEP1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
1AC1SOFTWAREGLU A:16 , VAL A:17 , ASP A:21 , ASN A:25 , LYS A:29 , GLU A:94 , ASP A:97 , LYS A:105 , HOH A:171BINDING SITE FOR RESIDUE GOL A 153

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3AXC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3AXC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3AXC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3AXC)

(-) Exons   (0, 0)

(no "Exon" information available for 3AXC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:149
               SCOP domains d3axca1 A:1-76 Ubiquitin                                                    d3axca2 A:77-149 Ubiquitin                                                SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140         

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3AXC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3AXC)

(-) Gene Ontology  (92, 92)

Asymmetric/Biological Unit(hide GO term definitions)


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  RS27A_HUMAN | P62979
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

        RS27A_HUMAN | P629791c3t 1cmx 1d3z 1f9j 1fxt 1g6j 1gjz 1nbf 1q5w 1s1q 1sif 1tbe 1ubi 1ubq 1ud7 1uzx 1xd3 1yx5 1yx6 1zo6 2ayo 2bgf 2den 2fuh 2g45 2gbj 2gbk 2gbm 2gbn 2gbr 2hth 2ibi 2j7q 2jf5 2jzz 2k6d 2k8b 2k8c 2kdf 2khw 2kjh 2klg 2kn5 2kox 2ktf 2kwu 2kwv 2l0f 2l0t 2nr2 2o6v 2ojr 2pe9 2pea 2w9n 2wdt 2xew 2xk5 2zcb 3a33 3by4 3c0r 3dvg 3dvn 3eec 3efu 3ehv 3h7p 3h7s 3hm3 3i3t 3ifw 3ihp 3jsv 3jvz 3jw0 3k9p 3kvf 3kw5 3ldz 3mhs 3mtn 3n30 3n32 3n3k 3nhe 3nob 3ns8 3phd 3phw 3tbl 3vdz 4r62 4ug0 4v6x 5a2q 5aj0 5flx 5t2c

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3AXC)