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(-) Description

Title :  CRYSTAL STRUCTURE OF THE ACETYLCHOLINE BINDING PROTEIN (ACHBP) FROM LYMNAEA STAGNALIS IN COMPLEX WITH NS3573 (1-(5-ETHOXYPYRIDIN-3-YL)-1, 4-DIAZEPANE)
 
Authors :  L. A. H. Rohde, P. K. Ahring, M. L. Jensen, E. O. Nielsen, D. Peters, C. Hel C. Krintel, K. Harpsoe, M. Gajhede, J. S. Kastrup, T. Balle
Date :  17 Oct 11  (Deposition) - 14 Dec 11  (Release) - 18 Sep 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.47
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Biol. Unit 3:  K,L,M,N,O  (1x)
Biol. Unit 4:  P,Q,R,S,T  (1x)
Keywords :  Lymnaea Stagnalis, Agonist, Ligand-Bindig Domain, Acetylcholine, Acetylcholine-Binding Protein, Acetylcholine-Binding Protein-Agonist Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. A. Rohde, P. K. Ahring, M. L. Jensen, E. Nielsen, D. Peters, C. Helgstrand, C. Krintel, K. Harpse, M. Gajhede, J. S. Kastrup, T. Balle
Intersubunit Bridge Formation Governs Agonist Efficacy At Nicotinic Acetylcholine Alpha 4 Beta 2 Receptors: Unique Role Of Halogen Bonding Revealed.
J. Biol. Chem. V. 287 4248 2012
PubMed-ID: 22170047  |  Reference-DOI: 10.1074/JBC.M111.292243

(-) Compounds

Molecule 1 - ACETYLCHOLINE-BINDING PROTEIN
    ChainsA, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T
    EngineeredYES
    Expression SystemSPODOPTERA FRUGIPERDA
    Expression System StrainSF9
    Expression System Taxid7108
    Expression System Vector TypePFASTBAC I
    Organism CommonGREAT POND SNAIL
    Organism ScientificLYMNAEA STAGNALIS
    Organism Taxid6523
    SynonymACH-BINDING PROTEIN, ACHBP

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric Unit ABCDEFGHIJKLMNOPQRST
Biological Unit 1 (1x)ABCDE               
Biological Unit 2 (1x)     FGHIJ          
Biological Unit 3 (1x)          KLMNO     
Biological Unit 4 (1x)               PQRST

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 33)

Asymmetric Unit (3, 33)
No.NameCountTypeFull Name
109P20Ligand/Ion1-(5-ETHOXYPYRIDIN-3-YL)-1,4-DIAZEPANE
2NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO410Ligand/IonSULFATE ION
Biological Unit 1 (3, 8)
No.NameCountTypeFull Name
109P5Ligand/Ion1-(5-ETHOXYPYRIDIN-3-YL)-1,4-DIAZEPANE
2NAG1Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO42Ligand/IonSULFATE ION
Biological Unit 2 (3, 8)
No.NameCountTypeFull Name
109P5Ligand/Ion1-(5-ETHOXYPYRIDIN-3-YL)-1,4-DIAZEPANE
2NAG1Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO42Ligand/IonSULFATE ION
Biological Unit 3 (2, 9)
No.NameCountTypeFull Name
109P5Ligand/Ion1-(5-ETHOXYPYRIDIN-3-YL)-1,4-DIAZEPANE
2NAG-1Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO44Ligand/IonSULFATE ION
Biological Unit 4 (3, 8)
No.NameCountTypeFull Name
109P5Ligand/Ion1-(5-ETHOXYPYRIDIN-3-YL)-1,4-DIAZEPANE
2NAG1Ligand/IonN-ACETYL-D-GLUCOSAMINE
3SO42Ligand/IonSULFATE ION

(-) Sites  (33, 33)

Asymmetric Unit (33, 33)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:89 , TRP A:143 , THR A:144 , TYR A:185 , CYS A:188 , TYR A:192 , ARG B:104 , LEU B:112 , MET B:114 , HOH B:260BINDING SITE FOR RESIDUE 09P A 211
02AC2SOFTWAREASN A:66 , SER D:68 , GLN P:22 , ARG P:23 , ARG P:61BINDING SITE FOR RESIDUE NAG A 212
03AC3SOFTWARETYR B:89 , TRP B:143 , THR B:144 , TYR B:185 , TYR B:192 , ARG C:104 , LEU C:112 , MET C:114 , HOH C:273BINDING SITE FOR RESIDUE 09P B 211
04AC4SOFTWARETYR C:89 , TRP C:143 , THR C:144 , TYR C:185 , TYR C:192 , HOH C:286 , TRP D:53 , ARG D:104 , LEU D:112 , MET D:114 , HOH D:902BINDING SITE FOR RESIDUE 09P C 211
05AC5SOFTWARETHR B:21 , ASP C:2 , ARG C:3BINDING SITE FOR RESIDUE SO4 C 212
06AC6SOFTWARETYR D:89 , TRP D:143 , TYR D:185 , TYR D:192 , ARG E:104 , LEU E:112 , MET E:114 , HOH E:230BINDING SITE FOR RESIDUE 09P D 211
07AC7SOFTWARETHR C:21 , ASP D:2 , ARG D:3 , PRO D:71BINDING SITE FOR RESIDUE SO4 D 212
08AC8SOFTWARETRP A:53 , ARG A:104 , LEU A:112 , MET A:114 , TYR E:89 , TRP E:143 , THR E:144 , TYR E:185 , TYR E:192 , HOH E:232BINDING SITE FOR RESIDUE 09P E 211
09AC9SOFTWARETYR F:89 , TRP F:143 , THR F:144 , TYR F:185 , TYR F:192 , HOH F:220 , ARG G:104 , LEU G:112 , MET G:114BINDING SITE FOR RESIDUE 09P F 211
10BC1SOFTWARETYR G:89 , TRP G:143 , TYR G:185 , TYR G:192 , HOH G:231 , ARG H:104 , LEU H:112 , MET H:114BINDING SITE FOR RESIDUE 09P G 211
11BC2SOFTWAREASN G:66 , SER G:68 , ARG L:23 , SER O:68 , HIS O:69BINDING SITE FOR RESIDUE NAG G 213
12BC3SOFTWARETYR H:89 , TRP H:143 , TYR H:185 , TYR H:192 , HOH H:1069 , TRP I:53 , ARG I:104 , LEU I:112 , MET I:114BINDING SITE FOR RESIDUE 09P H 211
13BC4SOFTWAREARG H:170 , ARG H:206 , SER H:207BINDING SITE FOR RESIDUE SO4 H 212
14BC5SOFTWARETYR I:89 , TRP I:143 , TYR I:185 , CYS I:188 , TYR I:192 , ARG J:104 , LEU J:112 , MET J:114 , HOH J:220BINDING SITE FOR RESIDUE 09P I 211
15BC6SOFTWAREARG F:148 , PRO G:71 , ASP G:72 , ARG I:25BINDING SITE FOR RESIDUE SO4 I 212
16BC7SOFTWARETRP F:53 , ARG F:104 , LEU F:112 , MET F:114 , TYR J:89 , TRP J:143 , THR J:144 , TYR J:185 , TYR J:192 , HOH J:222BINDING SITE FOR RESIDUE 09P J 211
17BC8SOFTWARETYR K:89 , TRP K:143 , THR K:144 , TYR K:185 , TYR K:192 , TRP L:53 , ARG L:104 , LEU L:112 , MET L:114 , HOH L:308BINDING SITE FOR RESIDUE 09P K 211
18BC9SOFTWAREASP K:2 , ARG K:3 , THR O:21BINDING SITE FOR RESIDUE SO4 K 212
19CC1SOFTWARETYR L:89 , TRP L:143 , TYR L:185 , TYR L:192 , HOH L:303 , ARG M:104 , LEU M:112 , MET M:114BINDING SITE FOR RESIDUE 09P L 211
20CC2SOFTWARETYR M:89 , TRP M:143 , TYR M:185 , CYS M:188 , TYR M:192 , HOH M:273 , ARG N:104 , LEU N:112 , MET N:114BINDING SITE FOR RESIDUE 09P M 211
21CC3SOFTWARETHR L:21 , ASP L:24 , ASP M:2 , ARG M:3BINDING SITE FOR RESIDUE SO4 M 212
22CC4SOFTWARETYR N:89 , TRP N:143 , TYR N:185 , TYR N:192 , HOH N:222 , ARG O:104 , LEU O:112 , MET O:114BINDING SITE FOR RESIDUE 09P N 211
23CC5SOFTWARETHR M:21 , ASP N:2 , ARG N:3 , PRO N:71 , HOH N:459BINDING SITE FOR RESIDUE SO4 N 212
24CC6SOFTWARETRP K:53 , ARG K:104 , LEU K:112 , MET K:114 , HOH K:220 , TYR O:89 , TRP O:143 , THR O:144 , TYR O:185 , TYR O:192BINDING SITE FOR RESIDUE 09P O 211
25CC7SOFTWARETHR N:21 , ASP O:2 , ARG O:3BINDING SITE FOR RESIDUE SO4 O 212
26CC8SOFTWARETYR P:89 , TRP P:143 , THR P:144 , TYR P:185 , CYS P:188 , TYR P:192 , ARG Q:104 , LEU Q:112 , MET Q:114 , HOH Q:226BINDING SITE FOR RESIDUE 09P P 211
27CC9SOFTWAREASP P:2 , ARG P:3 , THR T:21BINDING SITE FOR RESIDUE SO4 P 212
28DC1SOFTWARETYR Q:89 , TRP Q:143 , THR Q:144 , TYR Q:185 , TYR Q:192 , HOH Q:225 , HOH Q:447 , ARG R:104 , LEU R:112 , MET R:114 , HOH R:872BINDING SITE FOR RESIDUE 09P Q 211
29DC2SOFTWARETYR R:89 , TRP R:143 , TYR R:192 , ARG S:104 , LEU S:112 , MET S:114 , HOH S:222BINDING SITE FOR RESIDUE 09P R 211
30DC3SOFTWAREHOH D:1654 , ASN R:66BINDING SITE FOR RESIDUE NAG R 214
31DC4SOFTWARETYR S:89 , TRP S:143 , TYR S:185 , CYS S:187 , CYS S:188 , TYR S:192 , HOH S:228 , ARG T:104 , LEU T:112 , MET T:114BINDING SITE FOR RESIDUE 09P S 211
32DC5SOFTWAREARG P:104 , LEU P:112 , MET P:114 , TYR T:89 , TRP T:143 , TYR T:185 , TYR T:192 , HOH T:220BINDING SITE FOR RESIDUE 09P T 211
33DC6SOFTWARETHR S:21 , ASP T:2 , ARG T:3BINDING SITE FOR RESIDUE SO4 T 212

(-) SS Bonds  (39, 39)

Asymmetric Unit
No.Residues
1A:123 -A:136
2B:123 -B:136
3B:187 -B:188
4C:123 -C:136
5C:187 -C:188
6D:123 -D:136
7D:187 -D:188
8E:123 -E:136
9E:187 -E:188
10F:123 -F:136
11F:187 -F:188
12G:123 -G:136
13G:187 -G:188
14H:123 -H:136
15H:187 -H:188
16I:123 -I:136
17I:187 -I:188
18J:123 -J:136
19J:187 -J:188
20K:123 -K:136
21K:187 -K:188
22L:123 -L:136
23L:187 -L:188
24M:123 -M:136
25M:187 -M:188
26N:123 -N:136
27N:187 -N:188
28O:123 -O:136
29O:187 -O:188
30P:123 -P:136
31P:187 -P:188
32Q:123 -Q:136
33Q:187 -Q:188
34R:123 -R:136
35R:187 -R:188
36S:123 -S:136
37S:187 -S:188
38T:123 -T:136
39T:187 -T:188

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3U8K)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3U8K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3U8K)

(-) Exons   (0, 0)

(no "Exon" information available for 3U8K)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:209
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:209
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219         
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEI 228
               SCOP domains d3u8ka_ A: automated matches                                                                                                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee......hhhhh.....eeeeeeeeeeeeee......eeeeeeeeeeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k A   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEI 209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         

Chain B from PDB  Type:PROTEIN  Length:200
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8kb_ B: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.-----..........eeeeeeeeeeeeeee..eeeeeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k B   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT-----DSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |    -|      170       180       190       200     
                                                                                                                                                                                    155   161                                            

Chain C from PDB  Type:PROTEIN  Length:203
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8kc_ C: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee...--...........eeeeeeeeeeeeee......eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k C   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTE--DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      |160       170       180       190       200     
                                                                                                                                                                                      157  |                                             
                                                                                                                                                                                         160                                             

Chain D from PDB  Type:PROTEIN  Length:203
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:208
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219        
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSE 227
               SCOP domains d3u8kd_ D: automated matches                                                                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.-----..........eeeeeeeeeeeeee......eeeeeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k D   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT-----DSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSE 208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |    -|      170       180       190       200        
                                                                                                                                                                                    155   161                                               

Chain E from PDB  Type:PROTEIN  Length:201
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:204
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219    
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 223
               SCOP domains d3u8ke_ E: automated matches                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.---............eeeeeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3u8k E   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT---SDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 204
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |  160       170       180       190       200    
                                                                                                                                                                                    155 159                                             

Chain F from PDB  Type:PROTEIN  Length:203
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:206
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219      
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGR 225
               SCOP domains d3u8kf_ F: automated matches                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee..---...........eeeeeeeeeeeeee......eeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k F   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTT---DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGR 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150     | 160       170       180       190       200      
                                                                                                                                                                                     156 160                                              

Chain G from PDB  Type:PROTEIN  Length:200
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:204
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219    
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 223
               SCOP domains d3u8kg_ G: automated matches                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.----...........eeeeeeeeeeeee........eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3u8k G   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT----DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 204
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |  160       170       180       190       200    
                                                                                                                                                                                    155  160                                            

Chain H from PDB  Type:PROTEIN  Length:208
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:210
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEIL 229
               SCOP domains d3u8kh_ H: automated matches                                                                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.--.............eeeeeeeeeeeee........eeeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3u8k H   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT--NSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEIL 210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |  160       170       180       190       200       210
                                                                                                                                                                                    155  |                                                    
                                                                                                                                                                                       158                                                    

Chain I from PDB  Type:PROTEIN  Length:198
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:204
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219    
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 223
               SCOP domains d3u8ki_ I: automated matches                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.------.........eeeeeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3u8k I   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT------SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 204
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |    - |     170       180       190       200    
                                                                                                                                                                                    155    162                                          

Chain J from PDB  Type:PROTEIN  Length:204
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8kj_ J: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee...-............eeeeeeeeeeeeee......eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k J   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTE-SDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      |160       170       180       190       200     
                                                                                                                                                                                      157 |                                              
                                                                                                                                                                                        159                                              

Chain K from PDB  Type:PROTEIN  Length:203
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:206
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219      
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGR 225
               SCOP domains d3u8kk_ K: automated matches                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.---............eeeeeeeeeeeee........eeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k K   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT---SDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGR 206
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |  160       170       180       190       200      
                                                                                                                                                                                    155 159                                               

Chain L from PDB  Type:PROTEIN  Length:201
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:204
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219    
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 223
               SCOP domains d3u8kl_ L: automated matches                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee..---...........eeeeeeeeeeeeee......eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3u8k L   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTT---DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 204
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150     | 160       170       180       190       200    
                                                                                                                                                                                     156 160                                            

Chain M from PDB  Type:PROTEIN  Length:207
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:210
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEIL 229
               SCOP domains d3u8km_ M: automated matches                                                                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee..---...........eeeeeeeeeeeeeee..eeeeeeeeeeeeeeee.hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3u8k M   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTT---DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEIL 210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150     | 160       170       180       190       200       210
                                                                                                                                                                                     156 160                                                  

Chain N from PDB  Type:PROTEIN  Length:203
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:209
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219         
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEI 228
               SCOP domains d3u8kn_ N: automated matches                                                                                                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.------.........eeeeeeeeeeeeee......eeeeeeeeeeeee.hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k N   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT------SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSEI 209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |    - |     170       180       190       200         
                                                                                                                                                                                    155    162                                               

Chain O from PDB  Type:PROTEIN  Length:199
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8ko_ O: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.------.........eeeeeeeeeeeeee......eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k O   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT------SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |    - |     170       180       190       200     
                                                                                                                                                                                    155    162                                           

Chain P from PDB  Type:PROTEIN  Length:200
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8kp_ P: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.-----..........eeeeeeeeeeeeeee..eeeeeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k P   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT-----DSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |    -|      170       180       190       200     
                                                                                                                                                                                    155   161                                            

Chain Q from PDB  Type:PROTEIN  Length:198
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8kq_ Q: automated m  atches                                                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh.........--..eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.-----..........eeeeeeeeeeeeee......eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k Q   1 LDRADILYNIRQTSRPDVIPTQ--RPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT-----DSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20 |  |   30        40        50        60        70        80        90       100       110       120       130       140       150    |    -|      170       180       190       200     
                                                22 25                                                                                                                               155   161                                            

Chain R from PDB  Type:PROTEIN  Length:201
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8kr_ R: automated matches                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.----...........eeeeeeeeeeeee........eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k R   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT----DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |  160       170       180       190       200     
                                                                                                                                                                                    155  160                                             

Chain S from PDB  Type:PROTEIN  Length:198
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:205
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219     
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 224
               SCOP domains d3u8ks_ S: automated    matches                                                                                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh.......---..eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.----...........eeeeeeeeeeeeee......eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k S   1 LDRADILYNIRQTSRPDVIPT---RPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT----DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG 205
                                    10        20|   |   30        40        50        60        70        80        90       100       110       120       130       140       150    |  160       170       180       190       200     
                                               21  25                                                                                                                               155  160                                             

Chain T from PDB  Type:PROTEIN  Length:204
 aligned with ACHP_LYMST | P58154 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:208
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219        
           ACHP_LYMST    20 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSE 227
               SCOP domains d3u8kt_ T: automated matches                                                                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh............eeeeeeeeeeee........eeeeeeeeeeeee.hhhh........eeeee.hhh....eee.......ee....eeeee...eeee..eeeeeee...........eeeeeeeee.......eeeee.----...........eeeeeeeeeeeeee......eeeeeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3u8k T   1 LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPT----DDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRSE 208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    |  160       170       180       190       200        
                                                                                                                                                                                    155  160                                                

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 20)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3U8K)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3U8K)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T   (ACHP_LYMST | P58154)
molecular function
    GO:0005230    extracellular ligand-gated ion channel activity    Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts.
biological process
    GO:0034220    ion transmembrane transport    A process in which an ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0045202    synapse    The junction between a nerve fiber of one neuron and another neuron, muscle fiber or glial cell. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ACHP_LYMST | P581541i9b 1uv6 1uw6 1ux2 1yi5 2zju 2zjv 3u8j 3u8l 3u8m 3u8n 3wip 3wth 3wti 3wtj 3wtk 3wtl 3wtm 3wtn 3wto 3zdg 3zdh 4alx 4hqp 4nzb 4qaa 4qab 4qac 4um1 4um3 4zjt 4zk1 4zr6 4zru 5afh 5afj 5afk 5afl 5afm 5afn 5bp0 5j5f 5j5g 5j5h 5j5i 5t90

(-) Related Entries Specified in the PDB File

1uv6 X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP) IN COMPLEX WITH CARBAMYLCHOLINE
1uw6 X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP) IN COMPLEX WITH NICOTINE
3u8j CRYSTAL STRUCTURE OF THE ACETYLCHOLINE BINDING PROTEIN (ACHBP)FROM LYMNAEA STAGNALIS IN COMPLEX WITH NS3531 (1- (PYRIDIN-3-YL)-1,4-DIAZEPANE)
3u8l CRYSTAL STRUCTURE OF THE ACETYLCHOLINE BINDING PROTEIN (ACHBP) FROM LYMNAEA STAGNALIS IN COMPLEX WITH NS3570 (1- (5-PHENYLPYRIDIN-3-YL)-1,4-DIAZEPANE)
3u8m CRYSTAL STRUCTURE OF THE ACETYLCHOLINE BINDING PROTEIN (ACHBP) FROM LYMNAEA STAGNALIS IN COMPLEX WITH NS3920 (1- (6-BROMOPYRIDIN-3-YL)-1,4-DIAZEPANE)
3u8n CRYSTAL STRUCTURE OF THE ACETYLCHOLINE BINDING PROTEIN (ACHBP) FROM LYMNAEA STAGNALIS IN COMPLEX WITH NS3950 (1- (6-BROMO-5-ETHOXYPYRIDIN-3-YL)-1,4-DIAZEPANE)