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(-) Description

Title :  CRYSTAL STRUCTURE OF APL1 LEUCINE-RICH REPEAT DOMAIN
 
Authors :  R. H. G. Baxter, S. Steinert, Y. Chelliah, G. Volohonsky, E. A. Levashin J. Deisenhofer
Date :  29 Jul 10  (Deposition) - 22 Sep 10  (Release) - 05 Jan 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A
Keywords :  Leucine-Rich Repeat, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. H. Baxter, S. Steinert, Y. Chelliah, G. Volohonsky, E. A. Levashina J. Deisenhofer
A Heterodimeric Complex Of The Lrr Proteins Lrim1 And Apl1C Regulates Complement-Like Immunity In Anopheles Gambiae.
Proc. Natl. Acad. Sci. Usa V. 107 16817 2010
PubMed-ID: 20826443  |  Reference-DOI: 10.1073/PNAS.1010575107

(-) Compounds

Molecule 1 - APL1
    Chains: A
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Taxid: 7111
    Expression System Vector: PFASTBAC1
    Expression System Vector Type: BACULOVIRUS
    Gene: APL1
    Organism Common: AFRICAN MALARIA MOSQUITO
    Organism Scientific: ANOPHELES GAMBIAE
    Organism Taxid: 7165
    Strain: G3

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHOH A:128 , GLN A:304 , ASN A:325 , ASP A:344 , HOH A:660 , HOH A:773 , NAG A:1002BINDING SITE FOR RESIDUE NAG A 1001
2AC2SOFTWAREPRO A:499 , HOH A:773 , NAG A:1001BINDING SITE FOR RESIDUE NAG A 1002
3AC3SOFTWAREASN A:370 , HOH A:692 , HOH A:718BINDING SITE FOR RESIDUE NAG A 1003
4AC4SOFTWARETYR A:457 , ASN A:476 , ASP A:502 , HOH A:540 , HOH A:575BINDING SITE FOR RESIDUE NAG A 1004

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:145 -A:154
2A:486 -A:520
3A:508 -A:519

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Arg A:498 -Pro A:499

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3O6N)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3O6N)

(-) Exons   (0, 0)

(no "Exon" information available for 3O6N)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:378
                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee....eeee..ee.......ee...hhhhh...eeeee..ee.ee.hhhhhhh....eee.......ee............eee.....................eee.....................eee.....................eee.........hhhhh....eee.......eee......eee.......eee........eee........hhhhhhh....eee.......eee.hhhh......eee.......eee..........eee........hhhhhhhhh...eee..................eee.....eehhhhhhhh...................eee..eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3o6n A 140 QPEYKCIDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKIDYQLEHGLCCKES 523
                                  |155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515        
                                146|                                                                                                                                                                                                                                                                                                                                                                                  
                                 153
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3O6N)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3O6N)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3O6N)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  Cis Peptide Bonds
    Arg A:498 - Pro A:499   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

3o53