Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF THE ANTITHROMBIN-FACTOR IXA-PENTASACCHARIDE COMPLEX
 
Authors :  J. A. Huntington, D. J. D. Johnson
Date :  21 Oct 09  (Deposition) - 02 Feb 10  (Release) - 02 Feb 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  H,I,L
Keywords :  Michaelis Complex, Blood Coagulation, Calcium, Disulfide Bond, Egf-Like Domain, Glycoprotein, Hemophilia, Hydrolase, Pharmaceutical, Protease, Secreted, Serine Protease, Sulfation, Zymogen, Heparin-Binding, Protease Inhibitor, Serine Protease Inhibitor, Thrombophilia (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. J. Johnson, J. Langdown, J. A. Huntington
Molecular Basis Of Factor Ixa Recognition By Heparin-Activated Antithrombin Revealed By A 1. 7-A Structure Of The Ternary Complex.
Proc. Natl. Acad. Sci. Usa V. 107 645 2010
PubMed-ID: 20080729  |  Reference-DOI: 10.1073/PNAS.0910144107

(-) Compounds

Molecule 1 - COAGULATION FACTOR IXA LIGHT CHAIN
    ChainsL
    EC Number3.4.21.22
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentEGF2
    GeneF9
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymFACTOR IX, CHRISTMAS FACTOR, PLASMA THROMBOPLASTIN COMPONENT, PTC
 
Molecule 2 - COAGULATION FACTOR IXA HEAVY CHAIN
    ChainsH
    EC Number3.4.21.22
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneF9
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymFACTOR IX, CHRISTMAS FACTOR, PLASMA THROMBOPLASTIN COMPONENT, PTC
 
Molecule 3 - ANTITHROMBIN-III
    ChainsI
    EngineeredYES
    Expression System CellBHK
    GeneSERPINC1, AT3, PRO0309
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymATIII

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit HIL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 11)

Asymmetric/Biological Unit (6, 11)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
2FUC2Ligand/IonALPHA-L-FUCOSE
3MAN1Ligand/IonALPHA-D-MANNOSE
4MPD2Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
5NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
6NTP1Ligand/IonHEPARIN PENTASACCHARIDE

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU H:70 , ASN H:72 , GLU H:75 , GLU H:77 , GLU H:80 , HOH H:267BINDING SITE FOR RESIDUE CA H 500
02AC2SOFTWAREASN I:96 , HOH I:476 , FUC I:802BINDING SITE FOR RESIDUE NAG I 801
03AC3SOFTWARENAG I:801BINDING SITE FOR RESIDUE FUC I 802
04AC4SOFTWAREASN I:18 , PRO I:19 , MET I:20 , ASN I:155 , THR I:157 , HOH I:519 , HOH I:637 , HOH I:749 , HOH I:750 , HOH I:751 , NAG I:842BINDING SITE FOR RESIDUE NAG I 841
05AC5SOFTWAREASN I:18 , THR I:157 , NAG I:841 , MAN I:843BINDING SITE FOR RESIDUE NAG I 842
06AC6SOFTWARENAG I:842BINDING SITE FOR RESIDUE MAN I 843
07AC7SOFTWAREASN I:192 , HOH I:639 , FUC I:902BINDING SITE FOR RESIDUE NAG I 901
08AC8SOFTWARELYS I:193 , NAG I:901BINDING SITE FOR RESIDUE FUC I 902
09AC9SOFTWAREHIS H:91 , HIS H:92 , ASN H:93 , ASN H:100 , HIS H:101 , ASN H:178 , ASN H:179 , ARG H:233 , ASN H:236 , HOH H:284 , HOH H:315 , HOH H:346 , HOH H:378 , HOH H:452 , LYS I:11 , PRO I:12 , ARG I:13 , ALA I:43 , THR I:44 , ASN I:45 , ARG I:47 , VAL I:48 , SER I:112 , GLU I:113 , LYS I:114 , PHE I:122 , LYS I:125 , ARG I:129 , HOH I:434 , HOH I:447 , HOH I:478 , HOH I:516 , HOH I:517 , HOH I:541 , HOH I:629 , HOH I:631 , HOH I:730 , HOH I:744BINDING SITE FOR RESIDUE NTP I 433
10BC1SOFTWAREASN I:127 , LEU I:130 , LEU I:140 , SER I:142 , ILE I:219 , HOH I:527 , HOH I:530 , MPD I:5277BINDING SITE FOR RESIDUE MPD I 5276
11BC2SOFTWAREALA I:124 , VAL I:165 , TYR I:166 , GLY I:167 , MPD I:5276BINDING SITE FOR RESIDUE MPD I 5277

(-) SS Bonds  (10, 10)

Asymmetric/Biological Unit
No.Residues
1H:42 -H:58
2H:168 -H:182
3H:191 -H:220
4I:8 -I:128
5I:21 -I:95
6I:247 -I:430
7L:88 -L:99
8L:95 -L:109
9L:111 -L:124
10L:132 -H:122

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3KCG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (179, 179)

Asymmetric/Biological Unit (179, 179)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
001UniProtVAR_007033I39NANT3_HUMANDisease (AT3D)28929468II7N
002UniProtVAR_006573V227DFA9_HUMANDisease (HEMB)  ---HV16D
003UniProtVAR_017310V227FFA9_HUMANDisease (HEMB)137852242HV16F
004UniProtVAR_017311V228FFA9_HUMANDisease (HEMB)137852243HV17F
005UniProtVAR_006574V228LFA9_HUMANDisease (HEMB)137852243HV17L
006UniProtVAR_007034M52TANT3_HUMANUnclassified  ---IM20T
007UniProtVAR_071199C53FANT3_HUMANDisease (AT3D)  ---IC21F
008UniProtVAR_007035R56CANT3_HUMANDisease (AT3D)28929469IR24C
009UniProtVAR_006575Q241HFA9_HUMANDisease (HEMB)  ---HQ30H
010UniProtVAR_017352Q241KFA9_HUMANDisease (HEMB)  ---HQ30K
011UniProtVAR_007036P73LANT3_HUMANDisease (AT3D)121909551IP41L
012UniProtVAR_017312C252SFA9_HUMANDisease (HEMB)267606792HC42S
013UniProtVAR_017353C252YFA9_HUMANDisease (HEMB)  ---HC42Y
014UniProtVAR_006576G253EFA9_HUMANDisease (HEMB)  ---HG43E
015UniProtVAR_006577G253RFA9_HUMANDisease (HEMB)  ---HG43R
016UniProtVAR_007037R79CANT3_HUMANDisease (AT3D)121909547IR47C
017UniProtVAR_007038R79HANT3_HUMANDisease (AT3D)121909552IR47H
018UniProtVAR_007039R79SANT3_HUMANDisease (AT3D)121909547IR47S
019UniProtVAR_006578A265TFA9_HUMANDisease (HEMB)  ---HA55T
020UniProtVAR_007041R89CANT3_HUMANDisease (AT3D)147266200IR57C
021UniProtVAR_007042F90LANT3_HUMANDisease (AT3D)  ---IF58L
022UniProtVAR_017313C268WFA9_HUMANDisease (HEMB)137852246HC58W
023UniProtVAR_027452Y95CANT3_HUMANDisease (AT3D)  ---IY63C
024UniProtVAR_012316Y95SANT3_HUMANDisease (AT3D)  ---IY63S
025UniProtVAR_027453L98PANT3_HUMANDisease (AT3D)  ---IL66P
026UniProtVAR_006579A279TFA9_HUMANDisease (HEMB)137852247HA68T
027UniProtVAR_006580N283DFA9_HUMANDisease (HEMB)  ---HN72D
028UniProtVAR_007044P112TANT3_HUMANDisease (AT3D)  ---IP80T
029UniProtVAR_017314E291VFA9_HUMANDisease (HEMB)137852279HE80V
030UniProtVAR_006582R294GFA9_HUMANDisease (HEMB)  ---HR83G
031UniProtVAR_006583R294QFA9_HUMANDisease (HEMB)137852249HR83Q
032UniProtVAR_073980V296MFA9_HUMANUnclassified (HEMB)  ---HV85M
033UniProtVAR_017349C134YFA9_HUMANDisease (HEMB)  ---LC88Y
034UniProtVAR_027454M121KANT3_HUMANDisease (AT3D)  ---IM89K
035UniProtVAR_006560I136TFA9_HUMANDisease (HEMB)  ---LI90T
036UniProtVAR_006584H302RFA9_HUMANDisease (HEMB)  ---HH91R
037UniProtVAR_073978N138HFA9_HUMANUnclassified (HEMB)  ---LN92H
038UniProtVAR_006561G139DFA9_HUMANDisease (HEMB)  ---LG93D
039UniProtVAR_071200G125DANT3_HUMANDisease (AT3D)  ---IG93D
040UniProtVAR_006562G139SFA9_HUMANDisease (HEMB)  ---LG93S
041UniProtVAR_027455C127RANT3_HUMANDisease (AT3D)121909573IC95R
042UniProtVAR_017315N306SFA9_HUMANDisease (HEMB)137852251HN95S
043UniProtVAR_007045L131FANT3_HUMANDisease (AT3D)121909567IL99F
044UniProtVAR_007046L131VANT3_HUMANDisease (AT3D)  ---IL99V
045UniProtVAR_007047Q133KANT3_HUMANDisease (AT3D)  ---IQ101K
046UniProtVAR_006585I316FFA9_HUMANDisease (HEMB)  ---HI103F
047UniProtVAR_017354L318RFA9_HUMANDisease (HEMB)  ---HL105R
048UniProtVAR_006586L321QFA9_HUMANDisease (HEMB)  ---HL108Q
049UniProtVAR_006563C155FFA9_HUMANDisease (HEMB)  ---LC109F
050UniProtVAR_006564G160EFA9_HUMANDisease (HEMB)  ---LG114E
051UniProtVAR_027456K146EANT3_HUMANDisease (AT3D)  ---IK114E
052UniProtVAR_013085T147AANT3_HUMANPolymorphism2227606IT115A
053UniProtVAR_073981N328KFA9_HUMANUnclassified (HEMB)  ---HN115K
054UniProtVAR_073982N328YFA9_HUMANDisease (HEMB)  ---HN115Y
055UniProtVAR_007049S148PANT3_HUMANDisease (AT3D)121909569IS116P
056UniProtVAR_007050Q150PANT3_HUMANDisease (AT3D)765445413IQ118P
057UniProtVAR_006587P333HFA9_HUMANDisease (HEMB)  ---HP120H
058UniProtVAR_017355P333TFA9_HUMANDisease (HEMB)  ---HP120T
059UniProtVAR_007051H152YANT3_HUMANDisease (AT3D)  ---IH120Y
060UniProtVAR_006565Q167HFA9_HUMANDisease (HEMB)  ---LQ121H
061UniProtVAR_017350S169CFA9_HUMANDisease (HEMB)  ---LS123C
062UniProtVAR_017351C170FFA9_HUMANDisease (HEMB)  ---LC124F
063UniProtVAR_007053L158PANT3_HUMANDisease (AT3D)  ---IL126P
064UniProtVAR_027457C160YANT3_HUMANDisease (AT3D)  ---IC128Y
065UniProtVAR_006588T342KFA9_HUMANDisease (HEMB)  ---HT129K
066UniProtVAR_006589T342MFA9_HUMANDisease (HEMB)137852254HT129M
067UniProtVAR_007054R161QANT3_HUMANDisease (AT3D)121909563IR129Q
068UniProtVAR_006566C178RFA9_HUMANDisease (HEMB)  ---LC132R
069UniProtVAR_006567C178WFA9_HUMANDisease (HEMB)  ---LC132W
070UniProtVAR_012750N167TANT3_HUMANPolymorphism121909570IN135T
071UniProtVAR_006590G351DFA9_HUMANDisease (HEMB)  ---HG136D
072UniProtVAR_071201S170PANT3_HUMANDisease (AT3D)  ---IS138P
073UniProtVAR_006591W356CFA9_HUMANDisease (HEMB)  ---HW141C
074UniProtVAR_006592G357EFA9_HUMANDisease (HEMB)137852275HG142E
075UniProtVAR_017316G357RFA9_HUMANDisease (HEMB)137852257HG142R
076UniProtVAR_027458L178HANT3_HUMANDisease (AT3D)  ---IL146H
077UniProtVAR_027459F179LANT3_HUMANDisease (AT3D)  ---IF147L
078UniProtVAR_006593K362EFA9_HUMANDisease (HEMB)  ---HK148E
079UniProtVAR_006594G363WFA9_HUMANDisease (HEMB)  ---HG149W
080UniProtVAR_006595A366DFA9_HUMANDisease (HEMB)  ---HA152D
081UniProtVAR_007055Y190CANT3_HUMANPolymorphism  ---IY158C
082UniProtVAR_006596R379GFA9_HUMANDisease (HEMB)  ---HR165G
083UniProtVAR_006597R379QFA9_HUMANDisease (HEMB)137852259HR165Q
084UniProtVAR_007056Y198CANT3_HUMANDisease (AT3D)  ---IY166C
085UniProtVAR_027460Y198HANT3_HUMANDisease (AT3D)  ---IY166H
086UniProtVAR_006598C382YFA9_HUMANDisease (HEMB)  ---HC168Y
087UniProtVAR_017358L383FFA9_HUMANDisease (HEMB)  ---HL169F
088UniProtVAR_017357L383IFA9_HUMANDisease (HEMB)  ---HL169I
089UniProtVAR_062999R384LFA9_HUMANDisease (THPH8)137852283HR170L
090UniProtVAR_006599K387EFA9_HUMANDisease (HEMB)  ---HK173E
091UniProtVAR_006600I390FFA9_HUMANDisease (HEMB)  ---HI176F
092UniProtVAR_006601M394KFA9_HUMANDisease (HEMB)  ---HM180K
093UniProtVAR_017359F395IFA9_HUMANDisease (HEMB)  ---HF181I
094UniProtVAR_017360F395LFA9_HUMANDisease (HEMB)  ---HF181L
095UniProtVAR_017361C396FFA9_HUMANDisease (HEMB)  ---HC182F
096UniProtVAR_027461S214FANT3_HUMANDisease (AT3D)  ---IS182F
097UniProtVAR_006602C396SFA9_HUMANDisease (HEMB)137852273HC182S
098UniProtVAR_007057S214YANT3_HUMANDisease (AT3D)483352854IS182Y
099UniProtVAR_017317A397PFA9_HUMANDisease (HEMB)137852281HA183P
100UniProtVAR_071202I218NANT3_HUMANDisease (AT3D)  ---II186N
101UniProtVAR_007059N219DANT3_HUMANDisease (AT3D)121909571IN187D
102UniProtVAR_007058N219KANT3_HUMANDisease (AT3D)  ---IN187K
103UniProtVAR_027463S223PANT3_HUMANDisease (AT3D)121909572IS191P
104UniProtVAR_017362C407RFA9_HUMANDisease (HEMB)  ---HC191R
105UniProtVAR_006604C407SFA9_HUMANDisease (HEMB)  ---HC191S
106UniProtVAR_017318D410HFA9_HUMANDisease (HEMB)137852278HD194H
107UniProtVAR_017320S411GFA9_HUMANDisease (HEMB)137852277HA195G
108UniProtVAR_017319S411IFA9_HUMANDisease (HEMB)137852276HA195I
109UniProtVAR_017363G412EFA9_HUMANDisease (HEMB)  ---HG196E
110UniProtVAR_006605G413RFA9_HUMANDisease (HEMB)  ---HG197R
111UniProtVAR_017321P414TFA9_HUMANDisease (HEMB)137852265HP198T
112UniProtVAR_006606V419EFA9_HUMANDisease (HEMB)137852280HV203E
113UniProtVAR_006607F424VFA9_HUMANDisease (HEMB)  ---HF208V
114UniProtVAR_006608T426PFA9_HUMANDisease (HEMB)  ---HT210P
115UniProtVAR_027464T243IANT3_HUMANDisease (AT3D)  ---IT211I
116UniProtVAR_006609S430TFA9_HUMANDisease (HEMB)  ---HS214T
117UniProtVAR_006610W431GFA9_HUMANDisease (HEMB)  ---HW215G
118UniProtVAR_006611W431RFA9_HUMANDisease (HEMB)  ---HW215R
119UniProtVAR_071203V248GANT3_HUMANDisease (AT3D)  ---IV216G
120UniProtVAR_006612G432SFA9_HUMANDisease (HEMB)  ---HG216S
121UniProtVAR_006613G432VFA9_HUMANDisease (HEMB)  ---HG216V
122UniProtVAR_006614E433AFA9_HUMANDisease (HEMB)  ---HE217A
123UniProtVAR_006615E433KFA9_HUMANDisease (HEMB)767828752HE217K
124UniProtVAR_027465I251TANT3_HUMANDisease (AT3D)  ---II219T
125UniProtVAR_017364C435YFA9_HUMANDisease (HEMB)  ---HC220Y
126UniProtVAR_006616A436VFA9_HUMANDisease (HEMB)137852266HA221V
127UniProtVAR_027466W257RANT3_HUMANDisease (AT3D)  ---IW225R
128UniProtVAR_017365G442EFA9_HUMANDisease (HEMB)  ---HG226E
129UniProtVAR_017322G442RFA9_HUMANDisease (HEMB)137852267HG226R
130UniProtVAR_017323I443TFA9_HUMANDisease (HEMB)137852268HI227T
131UniProtVAR_027467F261LANT3_HUMANDisease (AT3D)  ---IF229L
132UniProtVAR_006618R449QFA9_HUMANDisease (HEMB)143018900HR233Q
133UniProtVAR_006619R449WFA9_HUMANDisease (HEMB)757996262HR233W
134UniProtVAR_006620Y450CFA9_HUMANDisease (HEMB)  ---HY234C
135UniProtVAR_007060E269KANT3_HUMANDisease (AT3D)758087836IE237K
136UniProtVAR_017324W453RFA9_HUMANDisease (HEMB)137852269HW237R
137UniProtVAR_006621I454TFA9_HUMANDisease (HEMB)  ---HI238T
138UniProtVAR_014308T461PFA9_HUMANPolymorphism4149751HT245P
139UniProtVAR_007062M283IANT3_HUMANDisease (AT3D)  ---IM251I
140UniProtVAR_027468M283VANT3_HUMANDisease (AT3D)  ---IM251V
141UniProtVAR_071204R293PANT3_HUMANDisease (AT3D)  ---IR261P
142UniProtVAR_007063L302PANT3_HUMANDisease (AT3D)  ---IL270P
143UniProtVAR_007064I316NANT3_HUMANDisease (AT3D)  ---II284N
144UniProtVAR_027469S323PANT3_HUMANDisease (AT3D)  ---IS291P
145UniProtVAR_007065E334KANT3_HUMANDisease (AT3D)  ---IE302K
146UniProtVAR_007067S381PANT3_HUMANDisease (AT3D)121909565IS349P
147UniProtVAR_007068R391QANT3_HUMANPolymorphism201541724IR359Q
148UniProtVAR_027470S397PANT3_HUMANDisease (AT3D)  ---IS365P
149UniProtVAR_027471D398HANT3_HUMANDisease (AT3D)  ---ID366H
150UniProtVAR_071205H401RANT3_HUMANDisease (AT3D)  ---IH369R
151UniProtVAR_027472S412RANT3_HUMANDisease (AT3D)  ---IS380R
152UniProtVAR_007069A414TANT3_HUMANDisease (AT3D)121909557IA382T
153UniProtVAR_007070A416PANT3_HUMANDisease (AT3D)28930978IA384P
154UniProtVAR_007071A416SANT3_HUMANDisease (AT3D)121909548IA384S
155UniProtVAR_007072A419VANT3_HUMANDisease (AT3D)121909568IA387V
156UniProtVAR_007073G424DANT3_HUMANDisease (AT3D)121909566IG392D
157UniProtVAR_007075R425CANT3_HUMANDisease (AT3D)121909554IR393C
158UniProtVAR_007074R425HANT3_HUMANDisease (AT3D)121909549IR393H
159UniProtVAR_007076R425PANT3_HUMANDisease (AT3D)121909549IR393P
160UniProtVAR_007077S426LANT3_HUMANDisease (AT3D)121909550IS394L
161UniProtVAR_007078F434CANT3_HUMANDisease (AT3D)  ---IF402C
162UniProtVAR_007080F434LANT3_HUMANDisease (AT3D)  ---IF402L
163UniProtVAR_007079F434SANT3_HUMANDisease (AT3D)  ---IF402S
164UniProtVAR_007081A436TANT3_HUMANDisease (AT3D)121909546IA404T
165UniProtVAR_007082N437KANT3_HUMANDisease (AT3D)  ---IN405K
166UniProtVAR_009258R438GANT3_HUMANDisease (AT3D)  ---IR406G
167UniProtVAR_007083R438MANT3_HUMANDisease (AT3D)  ---IR406M
168UniProtVAR_071206P439AANT3_HUMANDisease (AT3D)  ---IP407A
169UniProtVAR_007084P439LANT3_HUMANDisease (AT3D)121909555IP407L
170UniProtVAR_007085P439TANT3_HUMANDisease (AT3D)  ---IP407T
171UniProtVAR_027473L441PANT3_HUMANDisease (AT3D)  ---IL409P
172UniProtVAR_007086I453TANT3_HUMANDisease (AT3D)  ---II421T
173UniProtVAR_007087G456RANT3_HUMANDisease (AT3D)  ---IG424R
174UniProtVAR_007088R457TANT3_HUMANDisease (AT3D)  ---IR425T
175UniProtVAR_007090A459DANT3_HUMANDisease (AT3D)  ---IA427D
176UniProtVAR_007091P461LANT3_HUMANDisease (AT3D)121909564IP429L
177UniProtVAR_007092C462FANT3_HUMANDisease (AT3D)  ---IC430F
178UniProtVAR_017356I344LFA9_HUMANDisease (HEMB)  ---HI129BL
179UniProtVAR_006603R404TFA9_HUMANDisease (HEMB)  ---HR188AT

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (5, 5)

Asymmetric/Biological Unit (5, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EGF_2PS01186 EGF-like domain signature 2.FA9_HUMAN117-128
155-170
  1-
L:109-124
2TRYPSIN_DOMPS50240 Serine proteases, trypsin domain profile.FA9_HUMAN227-459  1H:16-243
3TRYPSIN_HISPS00134 Serine proteases, trypsin family, histidine active site.FA9_HUMAN263-268  1H:53-58
4TRYPSIN_SERPS00135 Serine proteases, trypsin family, serine active site.FA9_HUMAN405-416  1H:189-200
5SERPINPS00284 Serpins signature.ANT3_HUMAN434-444  1I:402-412

(-) Exons   (11, 12)

Asymmetric/Biological Unit (11, 12)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1bENST000002180991bENSE00002195519X:138612917-13861301195FA9_HUMAN1-30300--
1.2bENST000002180992bENSE00000677287X:138619169-138619332164FA9_HUMAN30-84550--
1.3ENST000002180993ENSE00001173335X:138619521-13861954525FA9_HUMAN85-9390--
1.4aENST000002180994aENSE00001173327X:138623235-138623348114FA9_HUMAN93-131391-
L:84-85
-
2
1.5bENST000002180995bENSE00001173320X:138630522-138630650129FA9_HUMAN131-174441-
L:85-128
-
44
1.6ENST000002180996ENSE00001173315X:138633221-138633423203FA9_HUMAN174-241682H:16-30
L:128-137
15
10
1.7ENST000002180997ENSE00001173311X:138642900-138643014115FA9_HUMAN242-280391H:31-69 (gaps)
-
40
-
1.8bENST000002180998bENSE00001029145X:138643683-1386456171935FA9_HUMAN280-4611821H:69-245 (gaps)
-
184
-

2.1aENST000003676981aENSE00001944151chr1:173886516-173886357160ANT3_HUMAN1-14140--
2.3aENST000003676983aENSE00000814673chr1:173884057-173883691367ANT3_HUMAN14-1361231I:3-104 (gaps)102
2.4cENST000003676984cENSE00000789910chr1:173881152-173880937216ANT3_HUMAN137-208721I:105-17672
2.5aENST000003676985aENSE00000789909chr1:173880029-173879892138ANT3_HUMAN209-254461I:177-22246
2.6bENST000003676986bENSE00000789908chr1:173879080-173878690391ANT3_HUMAN255-3851311I:223-353131
2.7aENST000003676987aENSE00001383315chr1:173876652-17387658865ANT3_HUMAN385-406221I:353-37422
2.8aENST000003676988aENSE00001876994chr1:173873203-173872947257ANT3_HUMAN407-464581I:375-43157

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain H from PDB  Type:PROTEIN  Length:235
 aligned with FA9_HUMAN | P00740 from UniProtKB/Swiss-Prot  Length:461

    Alignment length:235
                                   236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456     
           FA9_HUMAN    227 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKLT  461
               SCOP domains d3kcgh_ H: Coagulation factor IXa, protease domain                                                                                                                                                                                          SCOP domains
               CATH domains 3kcgH01     3kcgH02 H:28-120,H:233-245 Trypsin-like serine proteases                                       3kcgH01 H:16-27,H:121-232 Trypsin-like serine proteases                                                            3kcgH02       CATH domains
               Pfam domains Trypsin-3kcgH01 H:16-238                                                                                                                                                                                                            ------- Pfam domains
         Sec.struct. author ....ee........eeeee......eeeeeee..eeeehhhhh......eeee............eeeeeeeeee....hhhhh......eeeee................hhhhhhhhhh..eeeeee..............eeeeeeeehhhhhhh.........eeee................eeeeee..eeeeeeeeeee.........eeeee...hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) DF------------H----------SE-----------T--W----------T---D-------V--G-M-----R---S---------F-R--Q------K----H--------K-L------D----CE----EW--D------------G--YFL--E--F---KIFP------T--R--HGERT----E----V-P---TGSA-YV-----ET-----QC--RT------P SAPs(SNPs) (1)
             SAPs(SNPs) (2) FL------------K----------YR----------------------------------------Q---------------------------------Y----T--------M--------------R---------------------Q---I-----------LS----------S---I-------------------RVK--------R------W------------ SAPs(SNPs) (2)
                PROSITE (1) TRYPSIN_DOM  PDB: H:16-243 UniProt: 227-459                                                                                                                                                                                              -- PROSITE (1)
                PROSITE (2) ------------------------------------TRYPSI----------------------------------------------------------------------------------------------------------------------------------------TRYPSIN_SER --------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.6       Exon 1.7  PDB: H:31-69 (gaps)          ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------Exon 1.8b  PDB: H:69-245 (gaps) UniProt: 280-461                                                                                                                                       Transcript 1 (2)
                3kcg H   16 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNNMFCAGFHEGGRDSCQGDAGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKLT  245
                                    25        35||      46        56    |   65        75        85        95||     103       113       123      |131       141   ||  152       162       172       182  |    190       200       210      |221|      230       240     
                                               36|                    60A                                 95A|                               129A|             145|                                  184A 188A                          217|  |                        
                                                38                                                         95B                                129B              147                                                                      219  |                        
                                                                                                                                                                                                                                           221A                        

Chain I from PDB  Type:PROTEIN  Length:419
 aligned with ANT3_HUMAN | P01008 from UniProtKB/Swiss-Prot  Length:464

    Alignment length:429
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454         
          ANT3_HUMAN     35 SPVDICTAKPRDIPMNPMCIYRSPEKKATEDEGSEQKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCV  463
               SCOP domains d3kcgi_ I: Antithrombin                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------Serpin-3kcgI01 I:53-429                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains
         Sec.struct. author ...hhhhh.................----------.......hhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhh..hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeee.....hhhhhhhhhhhhh...eeehhhhhhhhhhhhhhhhhhhhh..................eeeeeeeeeee......hhhhheeeeee.....eeeeeeeeeeeeeeeee.hhh.eeeeee.....eeeeeee.....hhhhhhhh.hhhhhhhhhhhheeeeeeeeee.eeeeeeeehhhhhhhh..hhhhh....................eeeeeeeeee...............ee.......eeee....eeeeeee....eeeeeeee..... Sec.struct. author
             SAPs(SNPs) (1) ----N------------TF--C----------------L-----C---------CL----C--P-------------T--------K---D-R---F-K------------EAP-P-Y-----P-YQ-----T--P-------HL----------C-------C---------------F---ND---P-------------------I----G--T-----R---L-------K-------------I---------P--------P-------------N------P----------K----------------------------------------------P---------Q-----PH--R----------R-T-P--V----DCL-------C-TKGA-P-----------T--RT-D-LF- SAPs(SNPs) (1)
             SAPs(SNPs) (2) --------------------------------------------H---------------S-----------------------------------V------------------------------------------------------------------H---------------Y----K---------------------------------------------------------------V------------------------------------------------------------------------------------------------------------------------------------S--------H--------L---ML------------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) --------------------------------------------S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--------S----T------------------------ SAPs(SNPs) (3)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERPIN     ------------------- PROSITE (2)
           Transcript 2 (1) Exon 2.3a  PDB: I:3-104 (gaps) UniProt: 14-136 [INCOMPLETE]                                           Exon 2.4c  PDB: I:105-176 UniProt: 137-208                              Exon 2.5a  PDB: I:177-222 UniProt: 209-254    Exon 2.6b  PDB: I:223-353 UniProt: 255-385                                                                                         ---------------------Exon 2.8a  PDB: I:375-431 UniProt: 407-464 [INCOMPLETE]   Transcript 2 (1)
           Transcript 2 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 2.7a             --------------------------------------------------------- Transcript 2 (2)
                3kcg I    3 SPVDICTAKPRDIPMNPMCIYRSPE----------QKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCV  431
                                    12        22    |    -     |  42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422         
                                                   27         38                                                                                                                                                                                                                                                                                                                                                                                                         

Chain L from PDB  Type:PROTEIN  Length:54
 aligned with FA9_HUMAN | P00740 from UniProtKB/Swiss-Prot  Length:461

    Alignment length:54
                                   139       149       159       169       179    
           FA9_HUMAN    130 LDVTCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSV  183
               SCOP domains d3kcgl_ L: Factor IX (IXa)                             SCOP domains
               CATH domains 3kcgL00 L:84-137 Laminin                               CATH domains
               Pfam domains ------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhh..eeee.....eeee....eee......eee........... Sec.struct. author
             SAPs(SNPs) (1) ----Y-T-HD---------------F----E------H-CF-------R----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------S--------------------------------------W----- SAPs(SNPs) (2)
                PROSITE (1) -------------------------EGF_2           ------------- PROSITE (1)
                PROSITE (2) ------------------------------------------------------ PROSITE (2)
           Transcript 1 (1) 1.------------------------------------------Exon 1.6   Transcript 1 (1)
           Transcript 1 (2) -Exon 1.5b  PDB: L:85-128 UniProt: 131-174   --------- Transcript 1 (2)
                3kcg L   84 MDVTCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSV  137
                                    93       103       113       123       133    

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 3)

Asymmetric/Biological Unit

(-) CATH Domains  (2, 3)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (2, 2)

Asymmetric/Biological Unit

(-) Gene Ontology  (33, 39)

Asymmetric/Biological Unit(hide GO term definitions)
Chain H,L   (FA9_HUMAN | P00740)
molecular function
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0004175    endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0006888    ER to Golgi vesicle-mediated transport    The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
    GO:0007596    blood coagulation    The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
    GO:0007598    blood coagulation, extrinsic pathway    A protein activation cascade that contributes to blood coagulation and consists of the self-limited process linking exposure and activation of tissue factor to the activation of clotting factor X.
    GO:0007597    blood coagulation, intrinsic pathway    A protein activation cascade that contributes to blood coagulation and consists of the interactions among high molecular weight kininogen, prekallikrein, and factor XII that lead to the activation of clotting factor X.
    GO:0007599    hemostasis    The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.
    GO:0017187    peptidyl-glutamic acid carboxylation    The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0006465    signal peptide processing    The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell.
    GO:0031638    zymogen activation    The proteolytic processing of an inactive enzyme to an active form.
cellular component
    GO:0005796    Golgi lumen    The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.
    GO:0005788    endoplasmic reticulum lumen    The volume enclosed by the membranes of the endoplasmic reticulum.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain I   (ANT3_HUMAN | P01008)
molecular function
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0030414    peptidase inhibitor activity    Stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.
    GO:0002020    protease binding    Interacting selectively and non-covalently with any protease or peptidase.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004867    serine-type endopeptidase inhibitor activity    Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
biological process
    GO:0007596    blood coagulation    The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
    GO:0007599    hemostasis    The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.
    GO:0010951    negative regulation of endopeptidase activity    Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
    GO:0050728    negative regulation of inflammatory response    Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.
    GO:0010466    negative regulation of peptidase activity    Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.
    GO:2000266    regulation of blood coagulation, intrinsic pathway    Any process that modulates the frequency, rate or extent of blood coagulation, intrinsic pathway.
    GO:0007584    response to nutrient    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.
cellular component
    GO:0072562    blood microparticle    A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FUC  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MAN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MPD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NTP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3kcg)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3kcg
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  ANT3_HUMAN | P01008
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  FA9_HUMAN | P00740
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.4.21.22
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  300807
    Disease InformationOMIM
  306900
    Disease InformationOMIM
  613118
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  ANT3_HUMAN | P01008
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  FA9_HUMAN | P00740
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ANT3_HUMAN | P010081ant 1ath 1azx 1br8 1dzg 1dzh 1e03 1e04 1e05 1jvq 1lk6 1nq9 1oyh 1r1l 1sr5 1t1f 1tb6 2ant 2b4x 2b5t 2beh 2gd4 2hij 2znh 3evj 4eb1
        FA9_HUMAN | P007401cfh 1cfi 1edm 1ixa 1mgx 1nl0 1rfn 2wph 2wpi 2wpj 2wpk 2wpl 2wpm 3lc3 3lc5 4wm0 4wma 4wmb 4wmi 4wmk 4wn2 4wnh 4yzu 4z0k 4zae 5egm 5f84 5f85 5f86 5jb8 5jb9 5jba 5jbb 5jbc 5tno 5tnt

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3KCG)