Chain A from PDB Type:PROTEIN Length:146
aligned with B0RS32_XANCB | B0RS32 from UniProtKB/TrEMBL Length:310
Alignment length:146
157 167 177 187 197 207 217 227 237 247 257 267 277 287
B0RS32_XANCB 148 KMADPKELQDKFWKALKSDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 293
SCOP domains d3dmba_ A: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhheeeeee........eeeeee........eeeee.....hhhhh...eeeeeeee.....eeeeeeeeeee..hhhhhhhhhhhhhhhhh.hhhhh...eeeeeeeeeeeeee.............. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dmb A 0 GmADPKELQDKFWKALKSDRTVmLGLDGVEDGHARPmTAQIEGDSGGPIWFFTSKDNALIAmLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
| 9 19 | 29 | 39 49 59 | 69 79 89 99 109 119 129 139
| 22-MSE 36-MSE 61-MSE
1-MSE
Chain A from PDB Type:PROTEIN Length:146
aligned with Q8P8H7_XANCP | Q8P8H7 from UniProtKB/TrEMBL Length:162
Alignment length:146
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139
Q8P8H7_XANCP - -MADPKELQDKFWKALKSDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
SCOP domains d3dmba_ A: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhheeeeee........eeeeee........eeeee.....hhhhh...eeeeeeee.....eeeeeeeeeee..hhhhhhhhhhhhhhhhh.hhhhh...eeeeeeeeeeeeee.............. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dmb A 0 GmADPKELQDKFWKALKSDRTVmLGLDGVEDGHARPmTAQIEGDSGGPIWFFTSKDNALIAmLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
| 9 19 | 29 | 39 49 59 | 69 79 89 99 109 119 129 139
1-MSE 22-MSE 36-MSE 61-MSE
Chain B from PDB Type:PROTEIN Length:145
aligned with B0RS32_XANCB | B0RS32 from UniProtKB/TrEMBL Length:310
Alignment length:145
158 168 178 188 198 208 218 228 238 248 258 268 278 288
B0RS32_XANCB 149 MADPKELQDKFWKALKSDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 293
SCOP domains d3dmbb_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhheeeeee..hhhhh.eeee..........eeeeee...hhhhhhh..eeeeeeee.....eeeeeeeeeee..hhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeeeeeee.............. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dmb B 1 mADPKELQDKFWKALKSDRTVmLGLDGVEDGHARPmTAQIEGDSGGPIWFFTSKDNALIAmLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
| 10 20 | 30 | 40 50 60| 70 80 90 100 110 120 130 140
1-MSE 22-MSE 36-MSE 61-MSE
Chain B from PDB Type:PROTEIN Length:145
aligned with Q8P8H7_XANCP | Q8P8H7 from UniProtKB/TrEMBL Length:162
Alignment length:145
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Q8P8H7_XANCP 1 MADPKELQDKFWKALKSDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
SCOP domains d3dmbb_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhheeeeee..hhhhh.eeee..........eeeeee...hhhhhhh..eeeeeeee.....eeeeeeeeeee..hhhhhhhhhhhhhhhh..hhhhh..eeeeeeeeeeeeeee.............. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dmb B 1 mADPKELQDKFWKALKSDRTVmLGLDGVEDGHARPmTAQIEGDSGGPIWFFTSKDNALIAmLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
| 10 20 | 30 | 40 50 60| 70 80 90 100 110 120 130 140
1-MSE 22-MSE 36-MSE 61-MSE
Chain C from PDB Type:PROTEIN Length:134
aligned with B0RS32_XANCB | B0RS32 from UniProtKB/TrEMBL Length:310
Alignment length:142
161 171 181 191 201 211 221 231 241 251 261 271 281 291
B0RS32_XANCB 152 PKELQDKFWKALKSDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 293
SCOP domains d3dmbc_ C: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhheeee.--------.eeeeee........eeeeee...hhhhhhh..eeeeeeee.....eeeeeeeeeee..hhhhhhhhhhhhhhh...hhhhh..eeeeeeeeeeeeeee.............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dmb C 4 PKELQDKFWKALKSDRTVmLG--------ARPmTAQIEGDSGGPIWFFTSKDNALIAmLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
13 23| 33 | 43 53 |63 73 83 93 103 113 123 133 143
22-MSE 33 | 61-MSE
24 36-MSE
Chain C from PDB Type:PROTEIN Length:134
aligned with Q8P8H7_XANCP | Q8P8H7 from UniProtKB/TrEMBL Length:162
Alignment length:142
13 23 33 43 53 63 73 83 93 103 113 123 133 143
Q8P8H7_XANCP 4 PKELQDKFWKALKSDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
SCOP domains d3dmbc_ C: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhheeee.--------.eeeeee........eeeeee...hhhhhhh..eeeeeeee.....eeeeeeeeeee..hhhhhhhhhhhhhhh...hhhhh..eeeeeeeeeeeeeee.............. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dmb C 4 PKELQDKFWKALKSDRTVmLG--------ARPmTAQIEGDSGGPIWFFTSKDNALIAmLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAVVDRLWNPYVAAWYEGGKDDPKLALLRLDADHAQIWLNGSSLLAGIKVLLG 145
13 23| 33 | 43 53 |63 73 83 93 103 113 123 133 143
22-MSE 33 | 61-MSE
24 36-MSE
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |