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(-) Description

Title :  ASN-HYDROXYLATION STABILISES THE ANKYRIN REPEAT DOMAIN FOLD
 
Authors :  M. A. Mcdonough, C. J. Schofield
Date :  21 Jan 08  (Deposition) - 05 Feb 08  (Release) - 27 Oct 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Ankyrin Repeat, Unhydroxylated, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Kelly, M. A. Mcdonough, M. L. Coleman, P. J. Ratcliffe, C. J. Schofield
Asparagine Beta-Hydroxylation Stabilizes The Ankyrin Repeat Domain Fold
Mol Biosyst V. 5 52 2009
PubMed-ID: 19081931  |  Reference-DOI: 10.1039/B815271C
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 3 REPEAT SYNTHETIC ANKYRIN
    Chains: A
    Engineered: YES
    Other Details: SYNTHETICALLY DESIGNED CONSTRUCT
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric Unit (2, 3)
No.NameCountTypeFull Name
1CD1Ligand/IonCADMIUM ION
2CO2Ligand/IonCOBALT (II) ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2CO-1Ligand/IonCOBALT (II) ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2CO-1Ligand/IonCOBALT (II) ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:30 , GLN A:36 , GLU A:39 , ASP A:95BINDING SITE FOR RESIDUE CD A 401
2AC2SOFTWAREHIS A:69 , HOH A:1075 , HOH A:1076 , HOH A:1095 , HOH A:1096 , HOH A:1117BINDING SITE FOR RESIDUE CO A 402
3AC3SOFTWAREASP A:37 , HOH A:1044 , HOH A:1045 , HOH A:1046BINDING SITE FOR RESIDUE CO A 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ZGG)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2ZGG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2ZGG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2ZGG)

(-) Exons   (0, 0)

(no "Exon" information available for 2ZGG)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:88
                                                                                                                        
               SCOP domains --------d2zgga1 A:31-109 3ank                                                          - SCOP domains
               CATH domains 2zggA00 A:23-110  [code=1.25.40.20, no name defined]                                     CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhh.hhhhhhhhhhh............hhhhhhhhh.hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
                 2zgg A  23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 110
                                    32        42        52        62        72        82        92       102
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Designed proteins (167)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2ZGG)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2ZGG)

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  2zgg
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(-) Related Entries Specified in the PDB File

2zgd THE SAME PROTEIN, HYDROXYLATED ASN 84