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Title :   TOXIC SHOCK SYNDROME TOXIN-1 FROM STAPHYLOCOCCUS AUREUS: ORTHORHOMBICC222(1) CRYSTAL FORM

Authors :   G. S. Prasad, R. Radhakrishnan, D. T. Mitchell, C. A. Earhart, M. M. Dinges, W. J. Cook, P. M. Schlivert, D. H. Ohlendorf

Date :   04 Dec 96 (Deposition) - 24 Dec 97 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.05

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)

Keywords :   Toxin, Superantigen, Signal (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   G. S. Prasad, R. Radhakrishnan, D. T. Mitchell, C. A. Earhart, M. M. Dinges, W. J. Cook, P. M. Schlievert, D. H. Ohlendorf
Refined Structures Of Three Crystal Forms Of Toxic Shock Syndrome Toxin-1 And Of A Tetramutant With Reduced Activity.
Protein Sci. V. 6 1220 1997
PubMed-ID: 9194182
(for further references see the PDB file header)

Molecule 1 - TOXIC SHOCK SYNDROME TOXIN-1
	Chains	:	A, B, C
	Organism Scientific	:	STAPHYLOCOCCUS AUREUS
	Organism Taxid	:	1280
	Synonym	:	TSST-1

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 2TSS)

(no "Site" information available for 2TSS)

(no "SS Bond" information available for 2TSS)

(no "Cis Peptide Bond" information available for 2TSS)

(no "SAP(SNP)/Variant" information available for 2TSS)

Asymmetric Unit (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	STAPH_STREP_TOXIN_2	PS00278	Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2.	TSST_STAAU	161-184	3	A:121-144 B:121-144 C:121-144

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	STAPH_STREP_TOXIN_2	PS00278	Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2.	TSST_STAAU	161-184	1	A:121-144 - -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	STAPH_STREP_TOXIN_2	PS00278	Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2.	TSST_STAAU	161-184	1	- B:121-144 -

Biological Unit 3 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	STAPH_STREP_TOXIN_2	PS00278	Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2.	TSST_STAAU	161-184	1	- - C:121-144

(no "Exon" information available for 2TSS)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:194
 aligned with TSST_STAAU | P06886 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:194
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230    
           TSST_STAAU    41 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN 234
               SCOP domains d2tssa1 A:1-93 Toxic shock syndrome toxin-1 (TSST-1)                                         d2tssa2 A:94-194 Toxic shock syndrome toxin-1 (TSST-1)                                                SCOP domains
               CATH domains 2tssA01          2tssA02 A:18-88  [code=2.40.50.110, no name defined]                   2tssA01 A:1-17,A:89-194  [code=3.10.20.120, no name defined]                                               CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh...eeeeeeeeeeee..eeeee.....eeeee..............eeeeeeeeeeeeee.....eeeeeeeeee...eeeeee...eeeee..ee........eeeeee.hhhhhhhhhhhhhhh...........eeeeeee....eeeee......hhh....ee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------STAPH_STREP_TOXIN_2     -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2tss A   1 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN 194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190

Chain B from PDB  Type:PROTEIN  Length:194
 aligned with TSST_STAAU | P06886 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:194
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230    
           TSST_STAAU    41 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN 234
               SCOP domains d2tssb1 B:1-93 Toxic shock syndrome toxin-1 (TSST-1)                                         d2tssb2 B:94-194 Toxic shock syndrome toxin-1 (TSST-1)                                                SCOP domains
               CATH domains 2tssB01          2tssB02 B:18-88  [code=2.40.50.110, no name defined]                   2tssB01 B:1-17,B:89-194  [code=3.10.20.120, no name defined]                                               CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh...eeeeeeeeeeee..eeeee.....eeeee..............eeeeeeeeeeeeee.....eeeeeeeeee...eeeeee...eeeee..ee........eeeeee.hhhhhhhhhhhhhhh...........eeeeeee....eeeee......hhh....ee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------STAPH_STREP_TOXIN_2     -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2tss B   1 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN 194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190

Chain C from PDB  Type:PROTEIN  Length:194
 aligned with TSST_STAAU | P06886 from UniProtKB/Swiss-Prot  Length:234

    Alignment length:194
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230    
           TSST_STAAU    41 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN 234
               SCOP domains d2tssc1 C:1-93 Toxic shock syndrome toxin-1 (TSST-1)                                         d2tssc2 C:94-194 Toxic shock syndrome toxin-1 (TSST-1)                                                SCOP domains
               CATH domains 2tssC01          2tssC02 C:18-88  [code=2.40.50.110, no name defined]                   2tssC01 C:1-17,C:89-194  [code=3.10.20.120, no name defined]                                               CATH domains
           Pfam domains (1) ----Stap_Strp_toxin-2tssC04 C:5-91                                                         -------Stap_Strp_tox_C-2tssC01 C:99-194                                                                 Pfam domains (1)
           Pfam domains (2) ----Stap_Strp_toxin-2tssC05 C:5-91                                                         -------Stap_Strp_tox_C-2tssC02 C:99-194                                                                 Pfam domains (2)
           Pfam domains (3) ----Stap_Strp_toxin-2tssC06 C:5-91                                                         -------Stap_Strp_tox_C-2tssC03 C:99-194                                                                 Pfam domains (3)
         Sec.struct. author ...hhhhhhhhhhh...eeeeeeeeeeee..eeeee.....eeeee..............eeeeeeeeeeeeee.....eeeeeeeeee...eeeeee...eeeee..ee........eeeeee.hhhhhhhhhhhhhhh...........eeeeeee....eeeee......hhh....ee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------STAPH_STREP_TOXIN_2     -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2tss C   1 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN 194
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Roll (3276)

Topology: Ubiquitin-like (UB roll) (674)

Homologous Superfamily: [code=3.10.20.120, no name defined] (91)

Staphylococcus aureus. Organism_taxid: 1280 (11)

1a	2tssA01	A:1-17,A:89-194
1b	2tssB01	B:1-17,B:89-194
1c	2tssC01	C:1-17,C:89-194

Class: Mainly Beta (13760)

Architecture: Beta Barrel (4804)

Topology: OB fold (Dihydrolipoamide Acetyltransferase, E2P) (1040)

Homologous Superfamily: [code=2.40.50.110, no name defined] (136)

Staphylococcus aureus. Organism_taxid: 1280 (11)

2a	2tssA02	A:18-88
2b	2tssB02	B:18-88
2c	2tssC02	C:18-88

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (TSST_STAAU | P06886)

biological process
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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