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(-) Description

Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  02 Aug 07  (Deposition) - 21 Aug 07  (Release) - 24 Oct 12  (Revision)
Resolution :  2.10
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google))
Reference :  C. Bakolitsa, A. Kumar, K. K. Jin, D. Mcmullan, S. S. Krishna, M. D. Miller, P. Abdubek, C. Acosta, T. Astakhova, H. L. Axelrod, P. Burra, D. Carlton, C. Chen, H. J. Chiu, T. Clayton, D. Das, M. C. Deller, L. Duan, Y. Elias, K. Ellrott, D. Ernst, C. L. Farr, J. Feuerhelm, J. C. Grant, A. Grzechnik, S. K. Grzechnik, G. W. Han, L. Jaroszewski, H. A. Johnson, H. E. Klock, M. W. Knuth, P. Kozbial, D. Marciano, A. T. Morse, K. D. Murphy, E. Nigoghossian, A. Nopakun, L. Okach, J. Paulsen, C. Puckett, R. Reyes, C. L. Rife, N. Sefcovic, H. J. Tien, C. B. Trame, C. V. Trout, H. Van Den Bedem, D. Weekes, A. White, Q. Xu, K. O. Hodgson, J. Wooley, M. A. Elsliger, A. M. Deacon, A. Godzik, S. A. Lesley, I. A. Wilson
Structures Of The First Representatives Of Pfam Family Pf06684 (Duf1185) Reveal A Novel Variant Of The Bacillus Chorismate Mutase Fold And Suggest A Role In Amino-Acid Metabolism.
Acta Crystallogr. , Sect. F V. 66 1182 2010
PubMed-ID: 20944209  |  Reference-DOI: 10.1107/S1744309109050647

(-) Compounds

    Expression SystemESCHERICHIA COLI
    Expression System PlasmidSPEEDET
    Expression System StrainHK100
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneYP_166079.1, SPO0826
    Organism ScientificSILICIBACTER POMEROYI DSS-3
    Organism Taxid246200
    StrainDSS-3, DSM 15171

 Structural Features

(-) Chains, Units

Asymmetric Unit A
Biological Unit 1 (1x)A
Biological Unit 2 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
Biological Unit 2 (1, 8)
No.NameCountTypeFull Name

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
1Ser A:23 -Pro A:24
2Ala A:156 -Pro A:157

 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:147
 aligned with Q5LV76_RUEPO | Q5LV76 from UniProtKB/TrEMBL  Length:193

    Alignment length:169
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162         
               SCOP domains d2qtpa1 A:3-171 Uncharacterized protein SPO0826                                                                                                                           SCOP domains
               CATH domains 2qtpA00 A:3-171 BB2672-like                                                                                                                                               CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee..eeeeeeeeeeeeeeeee..........hhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.eeeeeeee....hhhhhhhhh....-------------...eeeee......eeeee..---------.eeeee.........eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                                    12        22        32        42        52        62        72        82 |      92       102         -   |   122|      132   |     -   |   152       162|        
                                                                           51-MSE                           84-MSE           102           116      |          136       146              163-MSE    

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit

(-) CATH Domains  (1, 1)

Asymmetric Unit
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2QTP)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q5LV76_RUEPO | Q5LV76)
molecular function
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular component
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.


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