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(-) Description

Title :  THREE-DIMENSIONAL STRUCTURE OF THE PHOSPHOLIPID-BINDING PROTEIN FROM RALSTONIA SOLANACEARUM Q8XV73_RALSQ IN COMPLEX WITH A PHOSPHOLIPID AT THE RESOLUTION 1.53 A. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET RSR89
 
Authors :  A. P. Kuzin, Y. Chen, S. Jayaraman, C. X. Chen, Y. Fang, K. Cunningham, L- R. Xiao, J. Liu, M. C. Baran, T. B. Acton, Rost B. , G. T. Montelione, J. F L. Tong, Northeast Structural Genomics Consortium (Nesg)
Date :  29 Jun 07  (Deposition) - 24 Jul 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Nesg, Rsr89, Q8Xv73, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. P. Kuzin, Y. Chen, S. Jayaraman, C. X. Chen, Y. Fang, K. Cunningham, L-C. Ma, R. Xiao, J. Liu, M. C. Baran, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong
Three-Dimensional Structure Of The Phospholipid-Binding Protein From Ralstonia Solanacearum Q8Xv73_ralsq In Complex With A Phospholipid At The Resolution 1. 53 A.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROBABLE SIGNAL PEPTIDE PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: RSC2958
    Mutation: YES
    Organism Scientific: RALSTONIA SOLANACEARUM
    Organism Taxid: 267608
    Strain: GMI1000

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1MSE1Mod. Amino AcidSELENOMETHIONINE
2PEF1Ligand/IonDI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:109 , ALA A:112 , GLN A:119 , ARG A:127 , ASP A:131 , ARG A:138 , ASN A:143 , TYR A:152 , ILE A:168 , HOH A:311 , HOH A:365 , HOH A:398 , HOH A:410 , HOH A:422 , HOH A:556 , HOH A:634BINDING SITE FOR RESIDUE PEF A 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2QGU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2QGU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2QGU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2QGU)

(-) Exons   (0, 0)

(no "Exon" information available for 2QGU)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:179
 aligned with Q8XV73_RALSO | Q8XV73 from UniProtKB/TrEMBL  Length:211

    Alignment length:179
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198         
         Q8XV73_RALSO    29 ADAQTTVKTAVDDVLATIKGDSDLRSGNMQKVFQLVDQKIVPRADFKRTTQIAMGRFWSQATPEQQQQIQDGFKTLLVRTYAGALANVRNQTVSYKPFRAAADDTDVVVRSTVNNNGEPVALDYRMEKSANGWKVYDINISGLWLSETYKNQFAEVISKRGGVSGLVQFLDERNAQLAK 207
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qguA01 A:29-73,A:117-172                    2qguA02 A:74-116,A:173-207                 2qguA01 A:29-73,A:117-172                               2qguA02 A:74-116,A:173-207          CATH domains
               Pfam domains ------Tol_Tol_Ttg2-2qguA01 A:35-202                                                                                                                                           ----- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh....eeee..........eeeeeeeeee..eeeeeeeeeeee..eeeeeeeee..eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qgu A  29 ADAQATVKTAVDDVLATIKGDPDLRGGNLQKVFQLVDQKIVPRADFKRTTQIAmGRFWSQATPEQQQQIQDGFKSLLIRTYAGALANVRNQTVAYKPFRAAADDTDVVVRSTVNNNGEPVALDYRVEKSPNGWKVYDINISGLWLSETYKNQFADVISKRGGVGGLVQFLDERNAQLAK 207
                                    38        48        58        68        78   |    88        98       108       118       128       138       148       158       168       178       188       198         
                                                                                82-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2QGU)

(-) CATH Domains  (2, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Tol_Tol_Ttg2] (1)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2QGU)

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