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(-) Description

Title :  CRYSTAL STRUCTURE OF PUTATIVE MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FROM ASPERGILLUS ORYZAE
 
Authors :  A. A. Fedorov, R. Toro, E. V. Fedorov, J. M. Sauder, S. K. Burley, S. C. Alm York Sgx Research Center For Structural Genomics (Nysgxrc)
Date :  04 May 07  (Deposition) - 22 May 07  (Release) - 24 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  B,C  (1x)
Biol. Unit 3:  D  (2x)
Biol. Unit 4:  A,B,C,D  (2x)
Biol. Unit 5:  B (1x),D (1x)
Biol. Unit 6:  A (1x),C (1x)
Keywords :  Structural Genomics, Nysgxrc, Target 9440A, Enolase Superfamily, Psi- 2, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. A. Fedorov, R. Toro, E. V. Fedorov, J. M. Sauder, S. K. Burley, S. C. Almo
Crystal Structure Of Putative Mandelate Racemase/Muconate Lactonizing Enzyme From Aspergillus Oryzae.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME
    Atcc42149
    ChainsA, B, C, D
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneAO090011000058
    Organism ScientificASPERGILLUS ORYZAE RIB40
    Organism Taxid510516
    StrainRIB 40

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (2x)A   
Biological Unit 2 (1x) BC 
Biological Unit 3 (2x)   D
Biological Unit 4 (2x)ABCD
Biological Unit 5 (1x) B (1x) D (1x)
Biological Unit 6 (1x)A (1x) C (1x) 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1MG4Ligand/IonMAGNESIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 5 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
Biological Unit 6 (0, 0)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:196 , GLU A:222 , ASP A:245 , ASP A:267 , HOH A:605 , HOH A:606 , HOH A:607BINDING SITE FOR RESIDUE MG A 401
2AC2SOFTWAREASP B:196 , GLU B:222 , ASP B:245 , ASP B:267 , LYS B:269 , HOH B:566 , HOH B:567 , HOH B:568BINDING SITE FOR RESIDUE MG B 401
3AC3SOFTWAREASP C:196 , GLU C:222 , ASP C:245 , ASP C:267 , HOH C:621 , HOH C:622 , HOH C:623BINDING SITE FOR RESIDUE MG C 401
4AC4SOFTWAREASP D:196 , GLU D:222 , ASP D:245 , ASP D:267 , HOH D:594 , HOH D:595 , HOH D:596BINDING SITE FOR RESIDUE MG D 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2PS2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2PS2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2PS2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2PS2)

(-) Exons   (0, 0)

(no "Exon" information available for 2PS2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:361
 aligned with Q2U1E8_ASPOR | Q2U1E8 from UniProtKB/TrEMBL  Length:371

    Alignment length:368
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
         Q2U1E8_ASPOR     3 DLKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
               SCOP domains d2ps2a1 A:3-130 automat       ed matches                                                                                        d2ps2a2 A:131-370 automated matches                                                                                                                                                                                                              SCOP domains
               CATH domains 2ps2A01 A:3-121,A:360-3       70 Enolase-like, N-terminal domain                                                       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2ps2A01     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee.........-------.eeeeeeeeee....eeeeee..........hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.hhhhhh.......ee.eeee...hhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhhh.......eeeee.....hhhhhhhhhhhh......eee....hhhhhhhhhh.....eee.....hhhhhhhhhhhh...eeeeehhhhhhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhh......eeee.hhhhhh....ee........ee..........eehhhhhh...eee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ps2 A   3 DLKIARIDVFQVDLPYSGGVYYL-------SFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
                                    12        22  |      -|       42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
                                                 25      33                                                                                                                                                                                                                                                                                                                                                 

Chain B from PDB  Type:PROTEIN  Length:361
 aligned with Q2U1E8_ASPOR | Q2U1E8 from UniProtKB/TrEMBL  Length:371

    Alignment length:368
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
         Q2U1E8_ASPOR     3 DLKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
               SCOP domains d2ps2b1 B:3-130 automat       ed matches                                                                                        d2ps2b2 B:131-370 automated matches                                                                                                                                                                                                              SCOP domains
               CATH domains 2ps2B01 B:3-121,B:360-3       70 Enolase-like, N-terminal domain                                                       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2ps2B01     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee.........-------.eeeeeeeeee....eeeeee..........hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.hhhhhh.......ee.eeee...hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhh.......eeeee.....hhhhhhhhhhhh......eee....hhhhhhhhhh.....eee.....hhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhh......eeee.hhhhhh....ee........ee..........eehhhhhh...eee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ps2 B   3 DLKIARIDVFQVDLPYSGGVYYL-------SFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
                                    12        22  |      -|       42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
                                                 25      33                                                                                                                                                                                                                                                                                                                                                 

Chain C from PDB  Type:PROTEIN  Length:361
 aligned with Q2U1E8_ASPOR | Q2U1E8 from UniProtKB/TrEMBL  Length:371

    Alignment length:368
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
         Q2U1E8_ASPOR     3 DLKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
               SCOP domains d2ps2c1 C:3-130 automat       ed matches                                                                                        d2ps2c2 C:131-370 automated matches                                                                                                                                                                                                              SCOP domains
               CATH domains 2ps2C01 C:3-121,C:360-3       70 Enolase-like, N-terminal domain                                                       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2ps2C01     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee.........-------.eeeeeeeeee....eeeeee..........hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..hhhhhh.......ee.eeee...hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhh.......eeeee.....hhhhhhhhhhhh......eee....hhhhhhhhhh.....eee.....hhhhhhhhhhhh...eeeeehhhhhhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhh......eeee.hhhhhh....ee........ee..........eehhhhhh...eee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ps2 C   3 DLKIARIDVFQVDLPYSGGVYYL-------SFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
                                    12        22  |      -|       42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
                                                 25      33                                                                                                                                                                                                                                                                                                                                                 

Chain D from PDB  Type:PROTEIN  Length:361
 aligned with Q2U1E8_ASPOR | Q2U1E8 from UniProtKB/TrEMBL  Length:371

    Alignment length:368
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
         Q2U1E8_ASPOR     3 DLKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
               SCOP domains d2ps2d1 D:3-130 automat       ed matches                                                                                        d2ps2d2 D:131-370 automated matches                                                                                                                                                                                                              SCOP domains
               CATH domains 2ps2D01 D:3-121,D:360-3       70 Enolase-like, N-terminal domain                                                       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2ps2D01     CATH domains
           Pfam domains (1) ------------------------------MR_MLE_N-2ps2D01 D:33-129                                                                        -------------------------------------------------MR_MLE-2ps2D05 D:179-245                                           ----------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ------------------------------MR_MLE_N-2ps2D02 D:33-129                                                                        -------------------------------------------------MR_MLE-2ps2D06 D:179-245                                           ----------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ------------------------------MR_MLE_N-2ps2D03 D:33-129                                                                        -------------------------------------------------MR_MLE-2ps2D07 D:179-245                                           ----------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) ------------------------------MR_MLE_N-2ps2D04 D:33-129                                                                        -------------------------------------------------MR_MLE-2ps2D08 D:179-245                                           ----------------------------------------------------------------------------------------------------------------------------- Pfam domains (4)
           Pfam domains (5) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-2ps2D09 D:245-357                                                                                       ------------- Pfam domains (5)
           Pfam domains (6) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-2ps2D10 D:245-357                                                                                       ------------- Pfam domains (6)
           Pfam domains (7) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-2ps2D11 D:245-357                                                                                       ------------- Pfam domains (7)
           Pfam domains (8) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-2ps2D12 D:245-357                                                                                       ------------- Pfam domains (8)
         Sec.struct. author ...eeeeeeeeeee.........-------.eeeeeeeeee....eeeeee..........hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.hhhhhh.......ee.eeee...hhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhh.......eeeee.....hhhhhhhhhhhh......eee....hhhhhhhhhh.....eee.....hhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhhh......eeee.hhhhhh....ee........ee..........eehhhhhh...eee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ps2 D   3 DLKIARIDVFQVDLPYSGGVYYL-------SFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLDPRRVDRINDAMDDALLGHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDFALEAPCATWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLAQTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVLGEAVASY 370
                                    12        22  |      -|       42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362        
                                                 25      33                                                                                                                                                                                                                                                                                                                                                 

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 12)

Asymmetric Unit

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q2U1E8_ASPOR | Q2U1E8)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

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