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(-) Description

Title :  CRYSTAL STRUCTURE OF THE Q4KFT4_PSEF5 PROTEIN FROM PSEUDOMONAS FLUORESCENS. NESG TARGET PLR1
 
Authors :  S. M. Vorobiev, H. Neely, S. Jayaraman, C. X. Chen, H. Janjua, R. Xiao, T. G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structural Genomic Consortium (Nesg)
Date :  17 Apr 07  (Deposition) - 01 May 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Nesg, Plr1, Putative Tetraacyldisaccharide-1-P 4-Kinase, Q4Kft4, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Vorobiev, H. Neely, S. Jayaraman, C. X. Chen, H. Janjua, R. Xiao, T. Acton, G. T. Montelione, J. F. Hunt, L. Tong
Crystal Structure Of The Q4Kft4_psef5 Protein From Pseudomonas Fluorescens.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Atcc: BAA-477
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)+MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PFL_1779
    Organism Scientific: PSEUDOMONAS FLUORESCENS
    Organism Taxid: 220664
    Strain: PF-5

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2PK7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2PK7)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2PK7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2PK7)

(-) Exons   (0, 0)

(no "Exon" information available for 2PK7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:64
 aligned with Y1779_PSEF5 | Q4KFT4 from UniProtKB/Swiss-Prot  Length:61

    Alignment length:64
                                                                                     61     
                                    12        22        32        42        52        |-    
           Y1779_PSEF5    3 TKLLDILACPICKGPLKLSADKTELISKGAGLAYPIRDGIPVMLESEARTLTTEERLDK-----  -
               SCOP domains d2pk7a1 A:3-61 Uncharacterized protein PFL1779             ----- SCOP domains
               CATH domains -----2pk7A01 A:8-66  [code=2.20.25.10, no name defined]          CATH domains
               Pfam domains ---------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........ee.....eeee....eeeeee..ee..hhhhhee.hhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------- Transcript
                  2pk7 A  3 TKLLDILACPICKGPLKLSADKTELISKGAGLAYPIRDGIPVmLESEARTLTTEERLDKLEHHH 66
                                    12        22        32        42  |     52        62    
                                                                     45-MSE                 


Chain B from PDB  Type:PROTEIN  Length:60
 aligned with Y1779_PSEF5 | Q4KFT4 from UniProtKB/Swiss-Prot  Length:61

    Alignment length:60
                                                                                     61 
                                    12        22        32        42        52        |-
           Y1779_PSEF5    3 TKLLDILACPICKGPLKLSADKTELISKGAGLAYPIRDGIPVMLESEARTLTTEERLDK-  -
               SCOP domains d2pk7b_ B: Uncharacterized protein PFL1779                   SCOP domains
               CATH domains -----2pk7B01 B:8-62  [code=2.20.25.10, no name defined]      CATH domains
           Pfam domains (1) Trm112p-2pk7B01 B:3-41                 --------------------- Pfam domains (1)
           Pfam domains (2) Trm112p-2pk7B02 B:3-41                 --------------------- Pfam domains (2)
         Sec.struct. author .hhhhhh.........ee.....eeee....eeeeee..ee.......ee.hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------ Transcript
                  2pk7 B  3 TKLLDILACPICKGPLKLSADKTELISKGAGLAYPIRDGIPVmLESEARTLTTEERLDKL 62
                                    12        22        32        42  |     52        62
                                                                     45-MSE
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Clan: Zn_Beta_Ribbon (109)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2PK7)

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 Related Entries

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(-) Related Entries Specified in the PDB File

2hf1 HOMOLOG: CRYSTAL STRUCTURE OF PUTATIVE TETRAACYLDISACCHARIDE-1-P 4-KINASE FROM CHROMOBACTERIUM VIOLACEUM. NESG TARGET CVR39.
plr1