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(-) Description

Title :  STRUCTURE OF TYR7-PYY IN SOLUTION
 
Authors :  O. Zerbe, A. Neumoin, J. Mares
Date :  26 Jan 07  (Deposition) - 25 Dec 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Helical Haripin, Folding, Hormone, Nmr (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Neumoin, J. Mares, M. Lerch-Bader, R. Bader, O. Zerbe
Probing The Formation Of Stable Tertiary Structure In A Model Miniprotein At Atomic Resolution: Determinants Of Stability Of A Helical Hairpin.
J. Am. Chem. Soc. V. 129 8811 2007
PubMed-ID: 17580866  |  Reference-DOI: 10.1021/JA0716960
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PEPTIDE YY
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainDH5A
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentPYY
    GenePYY
    MutationYES
    Organism CommonPIG
    Organism ScientificSUS SCROFA
    Organism Taxid9823
    SynonymPYY, PEPTIDE TYROSINE TYROSINE

 Structural Features

(-) Chains, Units

  
NMR Structure (20x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

(no "Site" information available for 2OOP)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2OOP)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2OOP)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2OOP)

(-) PROSITE Motifs  (2, 2)

NMR Structure (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PANCREATIC_HORMONE_2PS50276 Pancreatic hormone family profile.PYY_PIG1-36  1A:1-36
2PANCREATIC_HORMONE_1PS00265 Pancreatic hormone family signature.PYY_PIG20-36  1A:20-36

(-) Exons   (0, 0)

(no "Exon" information available for 2OOP)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:37
 aligned with PYY_PIG | P68005 from UniProtKB/Swiss-Prot  Length:36

    Alignment length:37
                                                              36     
                                    10        20        30     | 
               PYY_PIG    1 YPAKPEAPGEDASPEELSRYYASLRHYLNLVTRQRY-  -
               SCOP domains d2oopa1 A:1-36 Peptide YY, PYY      - SCOP domains
               CATH domains ------------------------------------- CATH domains
               Pfam domains Hormone_3-2oopA01 A:1-36            - Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------- SAPs(SNPs)
                PROSITE (1) PANCREATIC_HORMONE_2  PDB: A:1-36   - PROSITE (1)
                PROSITE (2) -------------------PANCREATIC_HORMON- PROSITE (2)
                 Transcript ------------------------------------- Transcript
                  2oop A  1 YPAKPEYPGEDASPEELSRYYASLRHYLNLVTRQRYx 37
                                    10        20        30      |
                                                               37-NH2

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Peptides (792)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2OOP)

(-) Pfam Domains  (1, 1)

NMR Structure

(-) Gene Ontology  (10, 10)

NMR Structure(hide GO term definitions)
Chain A   (PYY_PIG | P68005)
molecular function
    GO:0005179    hormone activity    The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.
    GO:0031841    neuropeptide Y receptor binding    Interacting selectively and non-covalently with a neuropeptide Y receptor.
    GO:0005184    neuropeptide hormone activity    The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones.
biological process
    GO:0007267    cell-cell signaling    Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.
    GO:0007586    digestion    The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.
    GO:0007631    feeding behavior    Behavior associated with the intake of food.
    GO:0007218    neuropeptide signaling pathway    The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor.
    GO:0032098    regulation of appetite    Any process which modulates appetite, the desire or physical craving for food.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PYY_PIG | P680051qbf 1ru5 1ruu 2oon 2rlk

(-) Related Entries Specified in the PDB File

1ruu STRUCTURE OF PYY IN DPC MICELLES
2oon STRUCTURE OF ALA14-PYY IN SOLUTION
2ooo REFINED STRUCTURE OF PYY IN SOLUTION