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(-) Description

Title :  SOLUTION STRUCTURE OF RIBBON BUIA
 
Authors :  A. H. Jin, H. Brandstaetter, S. T. Nevin, C. C. Tan, R. J. Clark, D. J. Adams, P. F. Alewood, D. J. Craik, N. L. Daly
Date :  03 Nov 06  (Deposition) - 25 Sep 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Ribbon Disulfide Connectivity, Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. H. Jin, H. Brandstaetter, S. T. Nevin, C. C. Tan, R. J. Clark, D. J. Adams, P. F. Alewood, D. J. Craik, N. L. Daly
Structure Of Alpha-Conotoxin Buia: Influences Of Disulfide Connectivity On Structural Dynamics
Bmc Struct. Biol. V. 7 28 2007
PubMed-ID: 17445276  |  Reference-DOI: 10.1186/1472-6807-7-28
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ALPHA-CONOTOXIN BUIA
    Chains: A
    Engineered: YES
    Other Details: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE OF THE PEPTIDE IS NATURALLY FOUND IN CONUS BULLATUS (BUBBLE CONE)
    Synthetic: YES

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

(no "Site" information available for 2NS3)

(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:2 -A:13
2A:3 -A:8

(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Pro A:6 -Pro A:7

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NS3)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ALPHA_CONOTOXINPS60014 Alpha-conotoxin family signature.CA1A_CONBU45-56  1A:2-13

(-) Exons   (0, 0)

(no "Exon" information available for 2NS3)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:14
 aligned with CA1A_CONBU | P69657 from UniProtKB/Swiss-Prot  Length:60

    Alignment length:14
                                    53    
            CA1A_CONBU   44 GCCSTPPCAVLYCG 57
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains Toxin_8-2ns3A- Pfam domains
         Sec.struct. author .............. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -ALPHA_CONOTO- PROSITE
                 Transcript -------------- Transcript
                  2ns3 A  1 GCCSTPPCAVLYCx 14
                                    10   |
                                        14-NH2
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2NS3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2NS3)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: Toxin_8] (6)

(-) Gene Ontology  (5, 5)

NMR Structure(hide GO term definitions)
Chain A   (CA1A_CONBU | P69657)
molecular function
    GO:0030550    acetylcholine receptor inhibitor activity    Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is decreased.
biological process
    GO:2000272    negative regulation of receptor activity    Any process that stops, prevents or reduces the frequency, rate or extent of receptor activity.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0035792    other organism postsynaptic membrane    A postsynaptic membrane that is part of another organism, i.e. a secondary organism with which the first organism is interacting. A postsynaptic membrane is a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters transmit the signal across the synaptic cleft to the postsynaptic membrane.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CA1A_CONBU | P69657: 2i28 4ez1

(-) Related Entries Specified in the PDB File

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