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(-) Description

Title :  CRYSTAL STRUCTURE OF PROBABLE TRANSCRIPTIONAL REGULATOR FROM PSEUDOMONAS AERUGINOSA
 
Authors :  C. Chang, E. Evdokimova, S. Altamentova, A. Savchenko, A. M. Edwards, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date :  24 Oct 06  (Deposition) - 21 Nov 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Biol. Unit 5:  I,J  (1x)
Keywords :  Pseudomonas Aeruginosa, Probable Transcriptional Regulator, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, E. Evdokimova, S. Altamentova, A. Savchenko, A. M. Edwards, A. Joachimiak
Crystal Structure Of Probable Transcriptional Regulator Fro Pseudomonas Aeruginosa
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROBABLE TRANSCRIPTIONAL REGULATOR
    Chains: A, B, C, D, E, F, G, H, I, J
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3) DERIVATIVES
    Expression System Taxid: 562
    Gene: PA1603
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric Unit : ABCDEFGHIJ
Biological Unit 1 (1x): AB        
Biological Unit 2 (1x):   CD      
Biological Unit 3 (1x):     EF    
Biological Unit 4 (1x):       GH  
Biological Unit 5 (1x):         IJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 10)

Asymmetric Unit (1, 10)
No.NameCountTypeFull Name
1MSE10Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
Biological Unit 5 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 2NNN)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2NNN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2NNN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NNN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2NNN)

(-) Exons   (0, 0)

(no "Exon" information available for 2NNN)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:134
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:134
                                    16        26        36        46        56        66        76        86        96       106       116       126       136    
         Q9I3B8_PSEAE     7 YRLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnA00 A:7-140 'winged helix' repressor DNA binding domain                                                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn A   7 YRLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    16        26        36        46        56       |66        76        86        96       106       116       126       136    
                                                                                    64-MSE                                                                        


Chain B from PDB  Type:PROTEIN  Length:134
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:134
                                    16        26        36        46        56        66        76        86        96       106       116       126       136    
         Q9I3B8_PSEAE     7 YRLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnB00 B:7-140 'winged helix' repressor DNA binding domain                                                                            CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn B   7 YRLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    16        26        36        46        56       |66        76        86        96       106       116       126       136    
                                                                                    64-MSE                                                                        


Chain C from PDB  Type:PROTEIN  Length:132
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnC00 C:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.eehhhhhhhh..hhhhhhhhhhhhhh...eeeee.......eeeeehhhhhhhhh-hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn C   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELE-GLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87        97       107 |     117       127       137   
                                                                                   64-MSE                                    107 |                               
                                                                                                                               109                               


Chain D from PDB  Type:PROTEIN  Length:133
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnD00 D:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.eehhhhhhhh..hhhhhhhhhhhhhhh..eeeee.......eeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn D   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87        97       107       117       127       137   
                                                                                   64-MSE                                                                        


Chain E from PDB  Type:PROTEIN  Length:132
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnE00 E:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhhhhh..eeeee..-....eeeeehhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn E   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADP-DGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87| |     97       107       117       127       137   
                                                                                   64-MSE                  88 |                                                  
                                                                                                             90                                                  


Chain F from PDB  Type:PROTEIN  Length:133
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnF00 F:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhh.eehhhhhhhh..hhhhhhhhhhhhhh...eeeee.......eeeeehhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn F   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87        97       107       117       127       137   
                                                                                   64-MSE                                                                        


Chain G from PDB  Type:PROTEIN  Length:132
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnG00 G:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.eehhhhhhh...hhhhhhhhhhhhhh...eeeee.......eeeeehhhhhhhhh-hhhhhhhhhhhhh...hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn G   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELE-GLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87        97       107 |     117       127       137   
                                                                                   64-MSE                                    107 |                               
                                                                                                                               109                               


Chain H from PDB  Type:PROTEIN  Length:133
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnH00 H:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.eehhhhhhhh..hhhhhhhhhhhhhhh..eeeee.......eeeeehhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn H   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87        97       107       117       127       137   
                                                                                   64-MSE                                                                        


Chain I from PDB  Type:PROTEIN  Length:133
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnI00 I:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.eehhhhhhh...hhhhhhhhhhhhhh...eeeee.......eeeeehhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn I   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87        97       107       117       127       137   
                                                                                   64-MSE                                                                        


Chain J from PDB  Type:PROTEIN  Length:133
 aligned with Q9I3B8_PSEAE | Q9I3B8 from UniProtKB/TrEMBL  Length:140

    Alignment length:133
                                    17        27        37        47        57        67        77        87        97       107       117       127       137   
         Q9I3B8_PSEAE     8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2nnnJ00 J:8-140 'winged helix' repressor DNA binding domain                                                                           CATH domains
           Pfam domains (1) ----------------------------MarR-2nnnJ01 J:36-94                                       ---------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------------------MarR-2nnnJ02 J:36-94                                       ---------------------------------------------- Pfam domains (2)
           Pfam domains (3) ----------------------------MarR-2nnnJ03 J:36-94                                       ---------------------------------------------- Pfam domains (3)
           Pfam domains (4) ----------------------------MarR-2nnnJ04 J:36-94                                       ---------------------------------------------- Pfam domains (4)
           Pfam domains (5) ----------------------------MarR-2nnnJ05 J:36-94                                       ---------------------------------------------- Pfam domains (5)
           Pfam domains (6) ----------------------------MarR-2nnnJ06 J:36-94                                       ---------------------------------------------- Pfam domains (6)
           Pfam domains (7) ----------------------------MarR-2nnnJ07 J:36-94                                       ---------------------------------------------- Pfam domains (7)
           Pfam domains (8) ----------------------------MarR-2nnnJ08 J:36-94                                       ---------------------------------------------- Pfam domains (8)
           Pfam domains (9) ----------------------------MarR-2nnnJ09 J:36-94                                       ---------------------------------------------- Pfam domains (9)
          Pfam domains (10) ----------------------------MarR-2nnnJ10 J:36-94                                       ---------------------------------------------- Pfam domains (10)
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhhhhh..eeeeee..eeeeeeeeehhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nnn J   8 RLDDQIGFILRQANQRYAALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAmDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQALAPLSLQEQETLRGLLARLI 140
                                    17        27        37        47        57      | 67        77        87        97       107       117       127       137   
                                                                                   64-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2NNN)

(-) CATH Domains  (1, 10)

Asymmetric Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 10)

Asymmetric Unit
(-)
Clan: HTH (544)
(-)
Family: MarR (16)
(-)
Pseudomonas aeruginosa (3)
1aMarR-2nnnJ01J:36-94
1bMarR-2nnnJ02J:36-94
1cMarR-2nnnJ03J:36-94
1dMarR-2nnnJ04J:36-94
1eMarR-2nnnJ05J:36-94
1fMarR-2nnnJ06J:36-94
1gMarR-2nnnJ07J:36-94
1hMarR-2nnnJ08J:36-94
1iMarR-2nnnJ09J:36-94
1jMarR-2nnnJ10J:36-94

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J   (Q9I3B8_PSEAE | Q9I3B8)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0003700    transcription factor activity, sequence-specific DNA binding    Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
    GO:0044212    transcription regulatory region DNA binding    Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
biological process
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.

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    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
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  Q9I3B8_PSEAE | Q9I3B8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 2NNN)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2NNN)