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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HYPOTHETICAL PROTEIN FROM SALMONELLA TYPHIMURIUM LT2. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET STR127.
 
Authors :  A. P. Kuzin, M. Abashidze, J. Seetharaman, H. Wang, C. Nwosu, K. Cunning L. C. Ma, R. Xiao, J. Liu, M. C. Baran, T. B. Acton, B. Rost, G. Montelione J. F. Hunt, Northeast Structural Genomics Consortium (Nesg)
Date :  23 Oct 06  (Deposition) - 07 Nov 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Nesg X-Ray Q8Zm67 Str127, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Dna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. P. Kuzin, M. Abashidze, J. Seetharaman, H. Wang, C. Nwosu, K. Cunningham, L. C. Ma, R. Xiao, J. Liu, M. C. Baran, T. B. Acton, B. Rost G. Montelione, L. Tong, J. F. Hunt
Crystal Structure Of The Hypothetical Protein From Salmonella Typhimurium Lt2. Northeast Structural Genomics Consortium Target Str127.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE DNA-BINDING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: STM3071
    Organism Scientific: SALMONELLA TYPHIMURIUM
    Organism Taxid: 602

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 9)
No.NameCountTypeFull Name
1MSE9Mod. Amino AcidSELENOMETHIONINE

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:137
 aligned with Q8ZM67_SALTY | Q8ZM67 from UniProtKB/TrEMBL  Length:141

    Alignment length:137
                                                                                                                                                                 141 
                                    15        25        35        45        55        65        75        85        95       105       115       125       135     | 
         Q8ZM67_SALTY     6 HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEATTSLTGTFEVISLNGTLELTGEHLHLAVSDPYGVMLGGHMMPGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSR-   -
               SCOP domains d2nmua1 A:6-141 Hypothetical protein STM3071                                                                                            - SCOP domains
               CATH domains -----2nmuA01 A:11-142 Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2                                        CATH domains
               Pfam domains -----DUF296-2nmuA01 A:11-125                                                                                            ----------------- Pfam domains
         Sec.struct. author ......eeeeeee....hhhhhhhhhhhhhh...eeeeeeeeeeeeeeee.......eeeeeeeeeeeeeeeee..eeeeeeeee.....eeeeee.....eeeeeeeeeee...eeeeeee......eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2nmu A   6 HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEATTSLTGTFEVISLNGTLELTGEHLHLAVSDPYGVmLGGHmmPGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSRL 142
                                    15        25        35        45        55        65        75        85        95|    ||105       115       125       135       
                                                                                                                     96-MSE||                                        
                                                                                                                         101-MSE                                     
                                                                                                                          102-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: DUF296] (2)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q8ZM67_SALTY | Q8ZM67)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

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2hx0 CRYSTAL STRUCTURE OF HYPOTHETICAL PROTEIN FROM SALMONELLA CHOLERAE-SUIS (SALMONELLA ENTERICA). NESG TARGET SCR59. 98% HOMOLOGY