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(-) Description

Title :  CRYSTAL STRUCTURE OF THE DB 911- D(CGCGAATTCGCG)2 COMPLEX AT 2.05 A RESOLUTION.
 
Authors :  M. P. H. Lee, S. Neidle
Date :  20 Oct 06  (Deposition) - 30 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym./Biol. Unit :  A,B
Keywords :  B-Type Dna Dodecamer With Compound Db 911. (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. P. H. Lee, S. Neidle
Crystal Structure Of The Db 911 - D(Cgcgaattcgcg)2 Complex At 2. 05 A Resolution.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'
    ChainsA, B
    EngineeredYES
    Other DetailsAT-RICH REGION IN THE GENOME OF ORGANISMS.
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1DB91Ligand/Ion2-{4'-[AMINO(IMINO)METHYL]BIPHENYL-3-YL}-1H-BENZIMIDAZOLE-6-CARBOXIMIDAMIDE
2MG1Ligand/IonMAGNESIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHOH A:50 , HOH A:51 , HOH A:52 , HOH B:42 , HOH B:43 , HOH B:44BINDING SITE FOR RESIDUE MG A 26
2AC2SOFTWAREDA A:6 , DT A:7 , DT A:8 , DC A:9 , HOH A:37 , DA B:17 , DA B:18 , DT B:19 , DT B:20 , DC B:21 , HOH B:27BINDING SITE FOR RESIDUE DB9 B 25

(-) SS Bonds  (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:12
                                           
                  2nlm A  1 CGCGAATTCGCG 12
                                    10  

Chain B from PDB  Type:DNA  Length:12
                                           
                  2nlm B 13 CGCGAATTCGCG 24
                                    22  

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(-) Gene Ontology  (0, 0)

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