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(-) Description

Title :  THE SOLUTION STRUCTURE OF DEFA1, A HIGHLY POTENT ANTIMICROBIAL PEPTIDE FROM THE HORSE
 
Authors :  S. Jung, M. Michalek, M. Shomali, F. D. Soennichsen
Date :  12 Jan 15  (Deposition) - 22 Apr 15  (Release) - 22 Apr 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
NMR Structure *:  A  (1x)
Keywords :  Antimicrobial Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Michalek, S. Jung, M. R. Shomali, S. Cauchard, F. D. Sonnichsen, J. Grotzinger
Solution Structure And Functional Studies Of The Highly Potent Equine Antimicrobial Peptide Defa1.
Biochem. Biophys. Res. Commun. V. 459 668 2015
PubMed-ID: 25769951  |  Reference-DOI: 10.1016/J.BBRC.2015.02.168

(-) Compounds

Molecule 1 - PANETH CELL-SPECIFIC ALPHA-DEFENSIN 1
    ChainsA
    EngineeredYES
    FragmentRESIDUES 65-98
    Organism CommonDOMESTIC HORSE,EQUINE
    Organism ScientificEQUUS CABALLUS
    Organism Taxid9796
    SyntheticYES

 Structural Features

(-) Chains, Units

  1
NMR Structure (10x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2MXQ)

(-) Sites  (0, 0)

(no "Site" information available for 2MXQ)

(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:2 -A:32
2A:4 -A:20
3A:10 -A:31

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MXQ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:34
                                                                 
               SCOP domains ---------------------------------- SCOP domains
               CATH domains ---------------------------------- CATH domains
               Pfam domains ---------------------------------- Pfam domains
         Sec.struct. author .................................. Sec.struct. author
                 SAPs(SNPs) ---------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------- PROSITE
                 Transcript ---------------------------------- Transcript
                  2mxq A  1 SCTCRRAWICRWGERHSGKCIDQKGSTYRLCCRR 34
                                    10        20        30    

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MXQ)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)

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