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(-) Description

Title :  SOLUTION NMR STRUCTURE OF DNA DODECAMER CONTAINING THE 5-HYDROXYCYTOSINE
 
Authors :  P. S. Donahue, M. W. Szulik, M. P. Stone
Date :  17 Apr 14  (Deposition) - 10 Sep 14  (Release) - 10 Sep 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (11x)
NMR Structure *:  A,B  (1x)
Keywords :  Dna, 5-Hydroxycytosine (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Szulik
Characterization Of 5-Hydroxycytosine In Dna
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - DNA_(5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5OC)P*GP*CP*G)-3')
    ChainsA, B
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
NMR Structure (11x)AB
NMR Structure * (1x)AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
15OC2Mod. Nucleotide2'-DEOXY-5-HYDROXYCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
NMR Structure * (1, 2)
No.NameCountTypeFull Name
15OC2Mod. Nucleotide2'-DEOXY-5-HYDROXYCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:12
                                           
                  2mo2 A  1 CGCGAATTxGCG 12
                                    10  
                                    9-5OC

Chain B from PDB  Type:DNA  Length:12
                                           
                  2mo2 B 13 CGCGAATTxGCG 24
                                    22  
                                   21-5OC

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NMR Structure(hide GO term definitions)
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