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(-) Description

Title :  STRUCTURE OF THE CHITIN BINDING PROTEIN 21 (CBP21)
 
Authors :  F. L. Aachmann, V. G. Eijsink, G. Vaaje-Kolstad
Date :  15 Aug 11  (Deposition) - 31 Aug 11  (Release) - 13 Aug 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Chitin Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. L. Aachmann, M. Sorlie, G. Skjak-Braek, V. G. Eijsink, G. Vaaje-Kolstad
Nmr Structure Of A Lytic Polysaccharide Monooxygenase Provides Insight Into Copper Binding, Protein Dynamics, And Substrate Interactions.
Proc. Natl. Acad. Sci. Usa V. 109 18779 2012
PubMed-ID: 23112164  |  Reference-DOI: 10.1073/PNAS.1208822109

(-) Compounds

Molecule 1 - CBP21
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System VectorPRSET-B
    GeneCBP
    Organism ScientificSERRATIA MARCESCENS
    Organism Taxid615
    StrainBJL200
    SynonymCHITIN-BINDING PROTEIN

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2LHS)

(-) Sites  (0, 0)

(no "Site" information available for 2LHS)

(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:14 -A:22
2A:118 -A:135

(-) Cis Peptide Bonds  (2, 40)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Ser A:6 -Pro A:7
21, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Phe A:38 -Pro A:39

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2LHS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2LHS)

(-) Exons   (0, 0)

(no "Exon" information available for 2LHS)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:170
 aligned with O83009_SERMA | O83009 from UniProtKB/TrEMBL  Length:197

    Alignment length:170
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197
         O83009_SERMA    28 HGYVESPASRAYQCKLQLNTQCGSVQYEPQSVEGLKGFPQAGPADGHIASADKSTFFELDQQTPTRWNKLNLKTGPNSFTWKLTARHSTTSWRYFITKPNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGSHVILAVWDIADTANAFYQAIDVNLSK 197
               SCOP domains d2lhsa_ A: Chitin-binding protein CBP21                                                                                                                                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhh......hhhh..hhhh.....................hhhhhhh.........eeee.eeeeeeeee.....eeeeeeeee..........hhh.ee....eeeee.......eeeeeeee.....eeeeeeeeeee....eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2lhs A   1 HGYVESPASRAYQCKLQLNTQCGSVQYEPQSVEGLKGFPQAGPADGHIASADKSTFFELDQQTPTRWNKLNLKTGPNSFTWKLTARHSTTSWRYFITKPNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGSHVILAVWDIADTANAFYQAIDVNLSK 170
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2LHS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2LHS)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2LHS)

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  Sites
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  Cis Peptide Bonds
    Phe A:38 - Pro A:39   [ RasMol ]  
    Ser A:6 - Pro A:7   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        O83009_SERMA | O830092bem 2ben

(-) Related Entries Specified in the PDB File

2ben X-RAY