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(-) Description

Title :  SOLUTION NMR STRUCTURE OF HOPABPPH1448_220_320 FROM PSEUDOMONAS SYRINGAE PV. PHASEOLICOLA STR. 1448A, MIDWEST CENTER FOR STRUCTURAL GENOMICS TARGET APC40132.4 AND NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET PST3A
 
Authors :  B. Wu, A. Yee, S. Houliston, A. Semesi, M. Garcia, A. U. Singer, A. Savche G. T. Montelione, A. Joachimiak, C. H. Arrowsmith, Northeast Struct Genomics Consortium (Nesg), Midwest Center For Structural Ge (Mcsg), Ontario Centre For Structural Proteomics (Ocsp)
Date :  28 Jun 11  (Deposition) - 13 Jul 11  (Release) - 22 Feb 12  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Type Iii Effector, Structural Genomics, Psi-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Midwest Center For Structural Genomics, Mcsg, Ontario Centre For Structural Proteomics, Ocsp, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. U. Singer, B. Wu, A. Yee, S. Houliston, X. Xu, H. Cui, T. Skarina, M. Garcia, A. Semesi, C. H. Arrowsmith, A. Savchenko
Structural Analysis Of Hoppmal Reveals The Presence Of A Second Adaptor Domain Common To The Hopab Family Of Pseudomonas Syringae Type Iii Effectors.
Biochemistry V. 51 1 2012
PubMed-ID: 22191472  |  Reference-DOI: 10.1021/BI2013883

(-) Compounds

Molecule 1 - EFFECTOR PROTEIN HOPAB1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: P15TV LIC
    Fragment: SEQUENCE DATABASE RESIDUES 220-320
    Gene: HOPAB1, VIRPPHA, PSPPH_A0127
    Organism Scientific: PSEUDOMONAS SYRINGAE PV. PHASEOLICOLA 1448A
    Organism Taxid: 264730
    Strain: 1448A / RACE 6

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2LF6)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:101
 aligned with HPAB1_PSE14 | Q48B61 from UniProtKB/Swiss-Prot  Length:539

    Alignment length:101
                                   229       239       249       259       269       279       289       299       309       319 
          HPAB1_PSE14   220 QGLDLESARLASAARHNHSANQTNEALRRLTQEGVDMERLRTSLGRYIMSLEPLPPDLRRALESVGINPFIPEELSLVDHPVLNFSAALNRMLASRQTTTN 320
               SCOP domains ----------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhh....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
                 2lf6 A 220 QGLDLESARLASAARHNHSANQTNEALRRLTQEGVDMERLRTSLGRYIMSLEPLPPDLRRALESVGINPFIPEELSLVDHPVLNFSAALNRMLASRQTTTN 320
                                   229       239       249       259       269       279       289       299       309       319
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2LF6)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2LF6)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (HPAB1_PSE14 | Q48B61)
biological process
    GO:0034053    modulation by symbiont of host defense-related programmed cell death    Any process in which an organism modulates the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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