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(-) Description

Title :  SOLUTION NMR STRUCTURE OF Q5HLI9 FROM STAPHYLOCOCCUS EPIDERMIDIS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SER147
 
Authors :  J. L. Mills, A. Eletsky, H. Lee, D. Lee, C. Ciccosanti, A. Sapin, L. Mao, R B. Rost, T. B. Acton, R. Xiao, J. K. Everett, J. H. Prestegard, G. T. Mont T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  22 Feb 11  (Deposition) - 20 Apr 11  (Release) - 22 Feb 12  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Structural Genomics, Northeast Structural Genomics Consortium (Nesg), Psi-Biology, Protein Structure Initiative, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. L. Mills, A. Eletsky, H. Lee, D. Lee, C. Ciccosanti, A. Sapin, L. Mao, R. Nair, B. Rost, T. B. Acton, R. Xiao, J. K. Everett, J. H. Prestegard, G. T. Montelione, T. Szyperski
Northeast Structural Genomics Consortium Target Ser147
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET 21-23C
    Gene: SERP1998
    Organism Scientific: STAPHYLOCOCCUS EPIDERMIDIS
    Organism Taxid: 176279
    Strain: ATCC 35984/RP62A

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2L9P)

(-) Sites  (0, 0)

(no "Site" information available for 2L9P)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2L9P)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2L9P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2L9P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2L9P)

(-) Exons   (0, 0)

(no "Exon" information available for 2L9P)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:164
 aligned with Q5HLI9_STAEQ | Q5HLI9 from UniProtKB/TrEMBL  Length:156

    Alignment length:164
                                                                                                                                                                                     156        
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150     |   -    
         Q5HLI9_STAEQ     1 MTIEKKKNKIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGNAFYAIQAPQMTSYTIAEYLQVDAPYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVKGKTTVTSTSTFPTESAAQQAIDMGVETGMNSTLNQLEKLLNQK--------   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------AHSA1-2l9pA01 A:17-154                                                                                                                    ---------- Pfam domains
         Sec.struct. author ...ee...eeee..ee..hhhhhhhhhhhhhhhh........eeeeee......eeeeeeeee..eeeeeeeee.......eeeeeeeee............eeeeeee......eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2l9p A   1 MTIEKKKNKIIFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNATKGGSAFYAIQAPQMISYTIAEYLQVDAPYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVKGKTTVTSTSTFPTESAAQQAIDMGVETGMNSTLNQLEKLLNQKLEHHHHHH 164
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2L9P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2L9P)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Bet_V_1_like (93)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (Q5HLI9_STAEQ | Q5HLI9)
biological process
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

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  Ligands, Modified Residues, Ions
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  Cis Peptide Bonds
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  2l9p
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  Q5HLI9_STAEQ | Q5HLI9
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

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