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(-) Description

Title :  SOLUTION NMR STRUCTURE OF THE PROTEIN YP_399305.1
 
Authors :  B. Mohanty, P. Serrano, M. Geralt, R. Horst, K. Wuthrich, Joint Center Structural Genomics (Jcsg)
Date :  30 Jul 10  (Deposition) - 18 Aug 10  (Release) - 03 Aug 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Duf1823, Hypothetical Protein, Cyanobacteria, Structural Genomics, Psi-Biology, Protein Structure Initiative, Joint Center For Structural Genomics, Jcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Mohanty, P. Serrano, M. Geralt, R. Horst, K. Wuthrich
Solution Nmr Structure Of The Protein Yp_399305. 1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PSPEEDET
    Gene: SYNPCC7942_0286
    Organism Scientific: SYNECHOCOCCUS ELONGATUS
    Organism Taxid: 1140
    Strain: PCC 7942

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2L1N)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2L1N)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:120
 aligned with Q31RK1_SYNE7 | Q31RK1 from UniProtKB/TrEMBL  Length:120

    Alignment length:120
                                    10        20        30        40        50        60        70        80        90       100       110       120
         Q31RK1_SYNE7     1 MGITITDELLWAILKDELSDAEANALVWQALGYVWDEAQSCWKTDLVAPEWRQDYPEPPDFIASRPATVKLTRSIPAPYKQLLKEELGFAGYSINELVPRKTRRATMTNWLLAYRRSQQD 120
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ---DUF1823-2l1nA01 A:4-118                                                                                            -- Pfam domains
         Sec.struct. author .....hhhhhhhhhhh..hhhhhhhhhhhhhh..ee....ee.....hhhhhh...........hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                 2l1n A   1 MGITITDELLWAILKDELSDAEANALVWQALGYVWDEAQSCWKTDLVAPEWRQDYPEPPDFIASRPATVKLTRSIPAPYKQLLKEELGFAGYSINELVPRKTRRATMTNWLLAYRRSQQD 120
                                    10        20        30        40        50        60        70        80        90       100       110       120
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2L1N)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2L1N)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF1823] (1)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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