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(-) Description

Title :  STRUCTURE OF THE 1,N2-ETHENODEOXYGUANOSINE LESION OPPOSITE A ONE-BASE DELETION IN DUPLEX DNA
 
Authors :  G. Shanmugam, I. D. Kozekov, P. F. Guengerich, C. J. Rizzo, M. P. Stone
Date :  05 Feb 10  (Deposition) - 23 Mar 10  (Release) - 26 May 10  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B
Keywords :  Ethenoguanine, One-Base Deletion, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  G. Shanmugam, I. D. Kozekov, F. P. Guengerich, C. J. Rizzo, M. P. Stone
Structure Of The 1, N(2)-Etheno-2'-Deoxyguanosine Lesion In The 3'-G(Epsilon Dg)T-5' Sequence Opposite A One-Base Deletion.
Biochemistry V. 49 2615 2010
PubMed-ID: 20201499  |  Reference-DOI: 10.1021/BI901516D

(-) Compounds

Molecule 1 - DNA (5'-D(*CP*GP*CP*AP*TP*(GNE)P*GP*AP*AP*TP*CP*C)-3')
    ChainsA
    EngineeredYES
    SyntheticYES
 
Molecule 2 - DNA (5'-D(*GP*GP*AP*TP*TP*CP*AP*TP*GP*CP*G)-3')
    ChainsB
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  
NMR Structure 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1GNE1Mod. Nucleotide1,N2-ETHENOGUANINE

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:12
                                           
                  2ktp A  1 CGCATxGAATCC 12
                                 |  10  
                                 6-GNE  

Chain B from PDB  Type:DNA  Length:11
                                          
                  2ktp B 13 GGATTCATGCG 23
                                    22 

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NMR Structure(hide GO term definitions)
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