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(-) Description

Title :  SOLUTION NMR STRUCTURE OF A BACTERIAL IG-LIKE (BIG_3) DOMAIN FROM BACILLUS CEREUS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BCR147A
 
Authors :  J. M. Aramini, D. Wang, C. T. Ciccosanti, H. Janjua, B. Rost, T. B. Acton, G. V. T. Swapna, J. K. Everett, G. T. Montelione, Northeast Structura Genomics Consortium (Nesg)
Date :  16 Oct 09  (Deposition) - 12 Jan 10  (Release) - 23 Nov 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Solution Nmr Structure, Big_3 Domain, Pf07523, Psi Big-Open Target, Nesg, Cell Wall, Hydrolase, Peptidoglycan-Anchor, Structural Genomics, Protein Structure Initiative, Northeast Structural Genomics Consortium (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. M. Aramini, D. Wang, C. T. Ciccosanti, H. Janjua, B. Rost, T. B. Acton R. Xiao, G. V. T. Swapna, J. K. Everett, G. T. Montelione
Solution Nmr Structure Of A Bacterial Ig-Like (Big_3) Domai From Bacillus Cereus. Northeast Structural Genomics Consortium Target Bcr147A
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - BACILLOLYSIN
    ChainsA
    EC Number3.4.24.28
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)MGK
    Expression System Taxid469008
    Expression System VectorBCR147A-658-751-21.1
    FragmentSEQUENCE DATABASE RESIDUES 658-753
    GeneBC_2506
    Organism ScientificBACILLUS CEREUS ATCC 14579
    Organism Taxid226900
    StrainATCC 14579 / DSM 31

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
NMR Structure * (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:664 , LEU A:665 , ASP A:693 , GLU A:695 , ASP A:725BINDING SITE FOR RESIDUE CA A 762

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2KPN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2KPN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2KPN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2KPN)

(-) Exons   (0, 0)

(no "Exon" information available for 2KPN)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:97
 aligned with Q81D73_BACCR | Q81D73 from UniProtKB/TrEMBL  Length:893

    Alignment length:97
                                   666       676       686       696       706       716       726       736       746       
         Q81D73_BACCR   657 EGNGETSDLEPKLTVPVGATIHVGDSFVPMAEVLAIDKEDGDLTSKIKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKVREEVKNDKPILK 753
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------Big_3-2kpnA01 A:671-741                                                ------------ Pfam domains
         Sec.struct. author ...........eee...eeeee.....hhhhhheee......hhhhheee........eeeeeeeeee.....eeeeeeeeeee............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                 2kpn A 657 MGNGETSDLEPKLTVPVGATIHVGDSFVPMAEVLAIDKEDGDLTSKIKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKVREEVKNDKPILE 753
                                   666       676       686       696       706       716       726       736       746       

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2KPN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2KPN)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: E-set (290)

(-) Gene Ontology  (9, 9)

NMR Structure(hide GO term definitions)
Chain A   (Q81D73_BACCR | Q81D73)
molecular function
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004222    metalloendopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
biological process
    GO:0007156    homophilic cell adhesion via plasma membrane adhesion molecules    The attachment of a plasma membrane adhesion molecule in one cell to an identical molecule in an adjacent cell.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0005618    cell wall    The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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