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(-) Description

Title :  SOLUTION STRUCTURE OF PROTEIN NMB1076 FROM NEISSERIA MENINGITIDIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MR101B.
 
Authors :  Y. Wu, M. Maglaqui, A. Eletsky, C. Ciccosanti, B. Sathyamoorthy, M. Jia E. Garcia, R. Nair, B. Rost, G. Swapna, T. Acton, R. Xiao, J. Everett, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Co (Nesg)
Date :  08 Jun 09  (Deposition) - 28 Apr 10  (Release) - 28 Apr 10  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Solution Structure, Nesg, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Replication (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Wu, M. Maglaqui, A. Eletsky, C. Ciccosanti, B. Sathyamoorthy, M. Jiang, E. Garcia, R. Nair, B. Rost, G. Swapna, T. Acton, R. Xiao, J. Everett, G. T. Montelione, T. Szyperski
Solution Structure Of Protein Nmb1076 From Neisseria Meningitidis. Northeast Structural Genomics Consortium Target Mr101B.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - DNAA-RELATED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: BL21(DE3)+ MAGIC
    Gene: NMB1076
    Organism Scientific: NEISSERIA MENINGITIDIS SEROGROUP B
    Organism Taxid: 491

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KJQ)

(-) Sites  (0, 0)

(no "Site" information available for 2KJQ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2KJQ)

(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Phe A:19 -Leu A:20

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:149
 aligned with Q9JZF5_NEIMB | Q9JZF5 from UniProtKB/TrEMBL  Length:222

    Alignment length:149
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140         
         Q9JZF5_NEIMB     1 MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQALLFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKP 149
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------Bac_DnaA-2kjqA01 A:73-149                                                     Pfam domains
         Sec.struct. author .......................hhhhhhhh......eeeee.......hhhhhhhhhhhhh....eeeee......hhhhhhh.eeeee......hhhhhhhhhhhhhhhhhh..eeeeee.........hhhhhhhhhhhee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2kjq A   1 MGHHHHHHSHMDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQALLFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKP 149
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2KJQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2KJQ)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: P-loop_NTPase (1112)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (Q9JZF5_NEIMB | Q9JZF5)
biological process
    GO:0032297    negative regulation of DNA-dependent DNA replication initiation    Any process that stops, prevents, or reduces the frequency, rate or extent of initiation of DNA-dependent DNA replication.

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  Cis Peptide Bonds
    Phe A:19 - Leu A:20   [ RasMol ]  
 

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