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(-) Description

Title :  NMR STRUCTURE OF THE PROTEIN TM1112
 
Authors :  B. Mohanty, B. Pedrini, P. Serrano, M. Geralt, R. Horst, T. Herrmann, I. K. Wuthrich, Joint Center For Structural Genomics (Jcsg)
Date :  28 Oct 08  (Deposition) - 25 Nov 08  (Release) - 12 Jan 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Thermotoga Maritima, Tm1112, Structural Genomics, Psi-2, Protein Structure Initiative, Joint Center For Structural Genomics, Jcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Mohanty, P. Serrano, B. Pedrini, K. Jaudzems, M. Geralt, R. Horst, T. Herrmann, M. A. Elsliger, I. A. Wilson, K. Wuthrich
Comparison Of Nmr And Crystal Structures For The Proteins Tm1112 And Tm1367.
Acta Crystallogr. , Sect. F V. 66 1381 2010
PubMed-ID: 20944235  |  Reference-DOI: 10.1107/S1744309110020956

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN TM1112
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: ROSSETA DE3
    Expression System Taxid: 562
    Expression System Vector: PET25B
    Gene: TM_1112
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2K9Z)

(-) Sites  (0, 0)

(no "Site" information available for 2K9Z)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2K9Z)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:89
 aligned with Q9X0J6_THEMA | Q9X0J6 from UniProtKB/TrEMBL  Length:89

    Alignment length:89
                                    10        20        30        40        50        60        70        80         
          Q9X0J6_THEMA    1 MEVKIEKPTPEKLKELSVEKWPIWEKEVSEFDWYYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNLF 89
               SCOP domains d2k9za_ A: Hypothetical protein TM1112                                                    SCOP domains
               CATH domains 2k9zA00 A:1-89 Jelly Rolls                                                                CATH domains
               Pfam domains ------------Cupin_3-2k9zA01 A:13-86                                                   --- Pfam domains
         Sec.struct. author ...eee..hhhhhhhhhhhhh...ee...eeeeee...eeeeeeeeeeeee.....eeee....eeee...eeeeeeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                  2k9z A  1 MEVKIEKPTPEKLKELSVEKWPIWEKEVSEFDWYYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNLF 89
                                    10        20        30        40        50        60        70        80
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Cupin (179)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        Q9X0J6_THEMA | Q9X0J6: 1lkn 1o5u

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