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(-) Description

Title :  NMR STRUCTURE OF PROTEIN Q6N9A4_RHOPA. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET RPT8
 
Authors :  K. K. Singarapu, Y. Wu, A. Yee, A. Eletsky, D. Sukumaran, M. Garcia, R. Xi S. Bansal, M. C. Baran, G. T. Montelione, P. H. James, C. H. Arrowsmith, T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  29 Jun 07  (Deposition) - 31 Jul 07  (Release) - 13 Jul 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
NMR Structure *:  A,B  (1x)
Keywords :  Homodimer, Protein Structure, Nmr Spectroscopy, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. K. Singarapu, Y. Wu, A. Yee, A. Eletsky, D. Sukumaran, M. Garcia, R. Xiao, S. Bansal, M. C. Baran, G. T. Montelione, P. James, C. H. Arrowsmith, T. Szyperski
Nmr Structure Of Protein Q6N9A4_rhopa.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Atcc: BAA-98
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: RPA1645
    Organism Scientific: RHODOPSEUDOMONAS PALUSTRIS
    Organism Taxid: 258594
    Strain: CGA009

 Structural Features

(-) Chains, Units

  12
NMR Structure (20x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2JS3)

(-) Sites  (0, 0)

(no "Site" information available for 2JS3)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2JS3)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2JS3)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2JS3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2JS3)

(-) Exons   (0, 0)

(no "Exon" information available for 2JS3)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:96
 aligned with Q6N9A4_RHOPA | Q6N9A4 from UniProtKB/TrEMBL  Length:75

    Alignment length:96
                                                 1                                                                          
                                     -         - |       9        19        29        39        49        59        69      
          Q6N9A4_RHOPA    - ---------------------MTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV 75
               SCOP domains ------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains --------------2js3A01 A:15-90 ITPase-like domains                                         ------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......................hhhhhhhhhhhhhhhhh.eeeee.....eeeee.....eee..............hhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------ Transcript
                  2js3 A  1 MGSSHHHHHHSSGRENLYFQGMTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV 96
                                    10        20        30        40        50        60        70        80        90      


Chain B from PDB  Type:PROTEIN  Length:96
 aligned with Q6N9A4_RHOPA | Q6N9A4 from UniProtKB/TrEMBL  Length:75

    Alignment length:96
                                                 1                                                                          
                                     -         - |       9        19        29        39        49        59        69      
          Q6N9A4_RHOPA    - ---------------------MTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV 75
               SCOP domains ------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains --------------2js3B01 B:15-90 ITPase-like domains                                         ------ CATH domains
           Pfam domains (1) ---------------------DUF3222-2js3B01 B:22-96                                                     Pfam domains (1)
           Pfam domains (2) ---------------------DUF3222-2js3B02 B:22-96                                                     Pfam domains (2)
         Sec.struct. author ........................hhhhhhhhhhhhhhhh..eeee.....eeee......ee..............hhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------ Transcript
                  2js3 B  1 MGSSHHHHHHSSGRENLYFQGMTDTAAEDVRKIATALLKTAIEIVSEEDGGAHNQCKLCGASVPWLQTGDEIKHADDCPVVIAKQILSSRPKLHAV 96
                                    10        20        30        40        50        60        70        80        90
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JS3)

(-) CATH Domains  (1, 2)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 2)

NMR Structure
(-)
Clan: no clan defined [family: DUF3222] (1)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2JS3)

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  2js3
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  Q6N9A4_RHOPA | Q6N9A4
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 2JS3)

(-) Related Entries Specified in the PDB File

rpt8 RELATED ID: 15352 RELATED DB: BMRB