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(-) Description

Title :  SOLUTION NMR STRUCTURE OF YFGJ FROM SALMONELLA TYPHIMURIUM MODELED WITH TWO ZN+2 BOUND, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET STR86
 
Authors :  K. Ding, T. A. Ramelot, J. R. Cort, H. Wang, C. Nwosu, K. Cunningham, L. Owens, L. Ma, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, M. A. Kennedy, Northeast Structural Genomics Consortium (Nesg)
Date :  28 Jun 07  (Deposition) - 10 Jul 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Two-Zinc Binding Protein, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Ding, T. A. Ramelot, J. R. Cort, H. Wang, C. Nwosu, K. Cunningham, L. Owens, L. Ma, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, M. A. Kennedy
Solution Nmr Structure Of Yfgj From Salmonella Typhimurium Modeled With Two Zn+2 Bound.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE CYTOPLASMIC PROTEIN
    Atcc: 700720
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YFGJ, STM2518
    Organism Scientific: SALMONELLA TYPHIMURIUM LT2
    Organism Taxid: 99287
    Strain: LT2, SGSC1412

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
1ZN2Ligand/IonZINC ION

(-) Sites  (2, 2)

NMR Structure (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:8 , CYS A:21 , GLU A:22 , THR A:23BINDING SITE FOR RESIDUE ZN A 150
2AC2SOFTWARECYS A:34 , CYS A:54 , HIS A:58 , GLY A:59BINDING SITE FOR RESIDUE ZN A 200

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2JRP)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2JRP)

 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2JRP)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:81
 aligned with Q8ZN54_SALTY | Q8ZN54 from UniProtKB/TrEMBL  Length:73

    Alignment length:81
                                                                                                   73        
                                    10        20        30        40        50        60        70  |      - 
          Q8ZN54_SALTY    1 MEITCPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLKACGAVDYFCQNGHGLISKKRVNFVISDQ--------  -
               SCOP domains --------------------------------------------------------------------------------- SCOP domains
               CATH domains -----------2jrpA01 A:12-72 YfgJ-like                                    --------- CATH domains
               Pfam domains -DUF1407-2jrpA01 A:2-71                                                ---------- Pfam domains
         Sec.struct. author ............ee...eee......eeeeeee.........eeee..eeee..............eeee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------- Transcript
                  2jrp A  1 MEITCPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLKACGAVDYFCQNGHGLISKKRVNFVISDQLEHHHHHH 81
                                    10        20        30        40        50        60        70        80
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JRP)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Zn_Beta_Ribbon (109)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (Q8ZN54_SALTY | Q8ZN54)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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