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(-) Description

Title :  PORTAL PROTEIN (GP6) FROM BACTERIOPHAGE SPP1
 
Authors :  A. A. Lebedev, M. H. Krause, A. L. Isidro, A. A. Vagin, E. V. Orlova, J. Tur E. J. Dodson, P. Tavares, A. A. Antson
Date :  21 Jan 07  (Deposition) - 27 Mar 07  (Release) - 29 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z
Keywords :  Bacteriophage Spp1, Dna Translocation, Molecular Motor, Viral Portal Protein, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. A. Lebedev, M. H. Krause, A. L. Isidro, A. A. Vagin, E. V. Orlova, J. Turner, E. J. Dodson, P. Tavares, A. A. Antson
Structural Framework For Dna Translocation Via The Viral Portal Protein
Embo J. V. 26 1984 2007
PubMed-ID: 17363899  |  Reference-DOI: 10.1038/SJ.EMBOJ.7601643
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PORTAL PROTEIN
    Chains: A, C, E, G, I, K, M, O, Q, S, U, W, Y
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PBLUESCRIPT SK(+)
    Mutation: YES
    Organism Scientific: BACTERIOPHAGE SPP1
    Organism Taxid: 10724
    Other Details: THE GENE 6 ALLELE CARRYING MUTATION SIZA (N365K) WAS CLONED FROM THE GENOME OF BACTERIOPHAGE SPP1 SIZA MUTANT
    Synonym: PORTAL VERTEX PROTEIN, GP6
    Variant: SIZA MUTANT
 
Molecule 2 - UNIDENTIFIED FRAGMENT OF PORTAL PROTEIN
    Chains: B, D, F, H, J, L, N, P, R, T, V, X, Z
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PBLUESCRIPT SK(+)
    Organism Scientific: BACTERIOPHAGE SPP1
    Organism Taxid: 10724
    Other Details: 69 RESIDUE SEGMENTS (FROM 170 TO 238) OF CHAINS A, C, E, G, I, K, M, O, Q, S, U, W, Y ARE PARTIALLY MODELLED BY 30 RESIDUE POLYALANINE SEGMENTS REPRESENTED AS CHAINS B, D, F, H, J, L, N, P, R, T, V, X, Z

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223242526
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQRSTUVWXYZ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 416)

Asymmetric/Biological Unit (3, 416)
No.NameCountTypeFull Name
1CA13Ligand/IonCALCIUM ION
2HG13Ligand/IonMERCURY (II) ION
3UNK390Mod. Amino Acid

(-) Sites  (26, 26)

Asymmetric Unit (26, 26)
No.NameEvidenceResiduesDescription
01AC1SOFTWARECYS A:55 , SER A:85 , PHE C:259 , TYR C:260 , ASP C:262BINDING SITE FOR RESIDUE HG A 701
02AC2SOFTWAREGLU A:60 , ARG A:83 , ASP C:262BINDING SITE FOR RESIDUE CA A 801
03AC3SOFTWARECYS C:55 , SER C:85 , PHE E:259 , TYR E:260BINDING SITE FOR RESIDUE HG C 701
04AC4SOFTWAREGLU C:60 , ARG C:83 , ASP E:262BINDING SITE FOR RESIDUE CA C 801
05AC5SOFTWARECYS E:55 , SER E:85 , PHE G:259 , TYR G:260BINDING SITE FOR RESIDUE HG E 701
06AC6SOFTWAREGLU E:60 , ARG E:83 , ASP G:262BINDING SITE FOR RESIDUE CA E 801
07AC7SOFTWARECYS G:55 , SER G:85 , PHE I:259 , TYR I:260BINDING SITE FOR RESIDUE HG G 701
08AC8SOFTWAREGLU G:60 , ARG G:83 , ASP I:262BINDING SITE FOR RESIDUE CA G 801
09AC9SOFTWARECYS I:55 , SER I:85 , PHE K:259 , TYR K:260BINDING SITE FOR RESIDUE HG I 701
10BC1SOFTWAREGLU I:60 , ARG I:83 , ASP K:262BINDING SITE FOR RESIDUE CA I 801
11BC2SOFTWARECYS K:55 , SER K:85 , PHE M:259 , TYR M:260BINDING SITE FOR RESIDUE HG K 701
12BC3SOFTWAREGLU K:60 , ARG K:83 , ASP M:262BINDING SITE FOR RESIDUE CA K 801
13BC4SOFTWARECYS M:55 , SER M:85 , PHE O:259 , ASP O:262BINDING SITE FOR RESIDUE HG M 701
14BC5SOFTWAREGLU M:60 , ARG M:83 , ASP O:262BINDING SITE FOR RESIDUE CA M 801
15BC6SOFTWARECYS O:55 , SER O:85 , PHE Q:259BINDING SITE FOR RESIDUE HG O 701
16BC7SOFTWAREGLU O:60 , ARG O:83 , ASP Q:262BINDING SITE FOR RESIDUE CA O 801
17BC8SOFTWARECYS Q:55 , SER Q:85 , PHE S:259BINDING SITE FOR RESIDUE HG Q 701
18BC9SOFTWAREGLU Q:60 , ARG Q:83 , ASP S:262BINDING SITE FOR RESIDUE CA Q 801
19CC1SOFTWARECYS S:55 , SER S:85 , PHE U:259 , TYR U:260BINDING SITE FOR RESIDUE HG S 701
20CC2SOFTWAREGLU S:60 , ARG S:83 , ASP U:262BINDING SITE FOR RESIDUE CA S 801
21CC3SOFTWARECYS U:55 , SER U:85 , PHE W:259 , TYR W:260BINDING SITE FOR RESIDUE HG U 701
22CC4SOFTWAREGLU U:60 , ARG U:83 , ASP W:262BINDING SITE FOR RESIDUE CA U 801
23CC5SOFTWARECYS W:55 , SER W:85 , PHE Y:259BINDING SITE FOR RESIDUE HG W 701
24CC6SOFTWAREGLU W:60 , ARG W:83 , ASP Y:262BINDING SITE FOR RESIDUE CA W 801
25CC7SOFTWAREPHE A:259 , TYR A:260 , CYS Y:55 , SER Y:85BINDING SITE FOR RESIDUE HG Y 701
26CC8SOFTWAREASP A:262 , GLU Y:60 , ARG Y:83BINDING SITE FOR RESIDUE CA Y 801

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2JES)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2JES)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2JES)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2JES)

(-) Exons   (0, 0)

(no "Exon" information available for 2JES)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes A  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes B   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|||11-UNK|||20-UNK|||29-UNK
                              3-UNK|| 12-UNK|| 21-UNK|| 30-UNK
                               4-UNK|  13-UNK|  22-UNK|   
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK
                                    9-UNK   18-UNK   27-UNK


Chain C from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes C  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain D from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes D   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain E from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes E  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain F from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes F   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain G from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes G  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain H from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes H   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain I from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes I  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain J from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes J   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain K from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes K  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain L from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes L   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain M from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes M  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain N from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes N   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain O from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes O  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain P from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes P   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain Q from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes Q  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain R from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes R   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain S from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes S  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain T from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes T   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain U from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes U  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain V from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes V   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain W from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes W  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain X from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes X   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK


Chain Y from PDB  Type:PROTEIN  Length:370
 aligned with PORTL_BPSPP | P54309 from UniProtKB/Swiss-Prot  Length:503

    Alignment length:439
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
          PORTL_BPSPP    29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) Phage_prot_Gp6-2jesY01 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (1)
           Pfam domains (2) Phage_prot_Gp6-2jesY02 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (2)
           Pfam domains (3) Phage_prot_Gp6-2jesY03 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (3)
           Pfam domains (4) Phage_prot_Gp6-2jesY04 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (4)
           Pfam domains (5) Phage_prot_Gp6-2jesY05 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (5)
           Pfam domains (6) Phage_prot_Gp6-2jesY06 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (6)
           Pfam domains (7) Phage_prot_Gp6-2jesY07 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (7)
           Pfam domains (8) Phage_prot_Gp6-2jesY08 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (8)
           Pfam domains (9) Phage_prot_Gp6-2jesY09 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (9)
          Pfam domains (10) Phage_prot_Gp6-2jesY10 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (10)
          Pfam domains (11) Phage_prot_Gp6-2jesY11 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (11)
          Pfam domains (12) Phage_prot_Gp6-2jesY12 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (12)
          Pfam domains (13) Phage_prot_Gp6-2jesY13 Y:29-467                                                                                                                                                                                                                                                                                                                                                                                                                         Pfam domains (13)
     Sec.struct. author (1) .hhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhh..eee.....eee...........hhhhhhhhhhhhhhh....eeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeeeee.....eeeeee....eeeee---------------------------------------------------------------------......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhh.eeee.....eeee....hhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh---.......hhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author (1)
     Sec.struct. author (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeee------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jes Y  29 PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDDILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVY---------------------------------------------------------------------WGRVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQY 467
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168|        -         -         -         -         -         -         -|      248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458         
                                                                                                                                                                      169                                                                   239                                                                                                                                                                                                                                    


Chain Z from PDB  Type:PROTEIN  Length:30
                                                              
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeee....eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2jes Z   1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  30
                            ||||||||10||||||||20||||||||30
                            ||||||||9-UNK|||18-UNK|||27-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK
                              3-UNK|  12-UNK|  21-UNK|  30-UNK
                               4-UNK   13-UNK   22-UNK    
                                5-UNK   14-UNK   23-UNK   
                                 6-UNK   15-UNK   24-UNK  
                                  7-UNK   16-UNK   25-UNK 
                                   8-UNK   17-UNK   26-UNK
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JES)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2JES)

(-) Pfam Domains  (1, 13)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Phage_prot_Gp6] (1)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,C,E,G,I,K,M,O,Q,S,U,W,Y   (PORTL_BPSPP | P54309)
biological process
    GO:0046718    viral entry into host cell    The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
    GO:0019076    viral release from host cell    The dissemination of mature viral particles from the host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.
cellular component
    GO:0019028    viral capsid    The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.
    GO:0046729    viral procapsid    A stable empty viral capsid produced during the assembly of viruses.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.

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  2jes
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  PORTL_BPSPP | P54309
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PORTL_BPSPP | P54309: 5a20 5a21

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2JES)