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(-) Description

Title :  THE CRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR (TETR FAMILY) FROM BACILLUS CEREUS
 
Authors :  R. Zhang, R. Wu, S. Moy, M. Cymborowski, W. Minor, A. Joachimiak, Midwes For Structural Genomics (Mcsg)
Date :  17 Jan 06  (Deposition) - 28 Feb 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.79
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Transcriptional Regulator, Tetr, Dna-Binding Protein, Bacillus Cereus, Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Transcription Regulator (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. Zhang, R. Wu, S. Moy, M. Cymborowski, W. Minor, Z. Otwinowski, A. Joachimiak
The Crystal Structure Of The Transcriptional Regulator (Tet Family) From Bacillus Cereus
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL REGULATOR, TETR FAMILY
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21
    Expression System PlasmidPDM68
    Expression System StrainBL21
    Expression System Taxid511693
    Expression System Vector TypePLASMID
    Organism ScientificBACILLUS CEREUS
    Organism Taxid226900
    StrainATCC 14579

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1MSE1Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:184
 aligned with Q81BJ4_BACCR | Q81BJ4 from UniProtKB/TrEMBL  Length:192

    Alignment length:184
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188    
         Q81BJ4_BACCR     9 RNIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVVMDGFLSAAAARLPVPDTGSALNDILIHATSLANFLISREGTIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIELSIDLIYGPIFYRLLVTGEKLDDSYVHDLVINAFEGIRLR 192
               SCOP domains d2fq4a1 A:9-77 Transcriptional regulator BC3163                      d2fq4a2 A:78-192 Transcriptional regulator BC3163                                                                   SCOP domains
               CATH domains 2fq4A01 A:9-55 Homeodomain-like                2fq4A02 A:56-192 Tetracycline Repressor, domain 2                                                                                         CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2fq4 A   9 RNIETQKAILSASYELLLESGFKAVTVDKIAERAKVSKATIYKWWPNKAAVVmDGFLSAAAARLPVPDTGSALNDILIHATSLANFLISREGTIINELVGEGQFDSKLAEEYRVRYFQPRRLQAKQLLEKGIKRGELKENLDIELSIDLIYGPIFYRLLVTGEKLDDSYVHDLVINAFEGIRLR 192
                                    18        28        38        48        58  |     68        78        88        98       108       118       128       138       148       158       168       178       188    
                                                                               61-MSE                                                                                                                               

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 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric Unit

(-) CATH Domains  (2, 2)

Asymmetric Unit

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q81BJ4_BACCR | Q81BJ4)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
biological process
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.

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