2F0X - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE AND FUNCTION OF HUMAN THIOESTERASE SUPERFAMILY MEMBER 2(THEM2)

Authors :   Z. Cheng, F. Song, X. Shan, Y. Wang, Z. Wei, W. Gong

Date :   14 Nov 05 (Deposition) - 10 Oct 06 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D  (1x)
Biol. Unit 2: E,F,G,H  (1x)

Keywords :   Hot Dog Fold, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Z. Cheng, F. Song, X. Shan, Z. Wei, Y. Wang, D. Dunaway-Mariano, W. Gong
Crystal Structure Of Human Thioesterase Superfamily Member 2
Biochem. Biophys. Res. Commun. V. 349 172 2006
PubMed-ID: 16934754 | Reference-DOI: 10.1016/J.BBRC.2006.08.025
(for further references see the PDB file header)

Molecule 1 - THIOESTERASE SUPERFAMILY MEMBER 2
	Chains	:	A, B, C, D, E, F, G, H
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET22B
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B	C	D
Biological Unit 2 (1x)	:					E	F	G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 68)

No.	Name	Count	Type	Full Name
1	MSE	48	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	20	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 35)

No.	Name	Count	Type	Full Name
1	MSE	24	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	11	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 33)

No.	Name	Count	Type	Full Name
1	MSE	24	Mod. Amino Acid	SELENOMETHIONINE
2	SO4	9	Ligand/Ion	SULFATE ION

Asymmetric Unit (20, 20)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP C:65 , VAL C:82 , SER C:83 , HOH C:1031 , HOH C:1044 , ASN D:50 , LEU D:55 , HIS D:56 , GLY D:57	BINDING SITE FOR RESIDUE SO4 C 1001
02	AC2	SOFTWARE	ASP A:65 , SER A:83 , HOH A:1064 , ASN B:50 , GLY B:57	BINDING SITE FOR RESIDUE SO4 A 1002
03	AC3	SOFTWARE	ARG A:23 , ARG B:23 , HOH B:1029 , HOH B:1039	BINDING SITE FOR RESIDUE SO4 B 1003
04	AC4	SOFTWARE	ASN G:50 , GLY G:57 , ASP H:65 , SER H:83	BINDING SITE FOR RESIDUE SO4 H 1004
05	AC5	SOFTWARE	ASN E:50 , LEU E:55 , GLY E:57 , ASP F:65 , VAL F:82 , SER F:83 , HOH F:1042 , HOH F:1069	BINDING SITE FOR RESIDUE SO4 F 1005
06	AC6	SOFTWARE	ASP G:65 , SER G:83 , ASN H:50 , GLY H:57	BINDING SITE FOR RESIDUE SO4 G 1006
07	AC7	SOFTWARE	GLY B:110 , LYS B:111 , THR B:112 , LEU B:113 , HIS D:137	BINDING SITE FOR RESIDUE SO4 B 1007
08	AC8	SOFTWARE	ASN A:50 , GLY A:57 , ASP B:65 , SER B:83	BINDING SITE FOR RESIDUE SO4 B 1008
09	AC9	SOFTWARE	LYS C:37 , HIS C:105 , SER G:3	BINDING SITE FOR RESIDUE SO4 C 1009
10	BC1	SOFTWARE	LYS G:111 , THR G:112 , LEU G:113	BINDING SITE FOR RESIDUE SO4 G 1010
11	BC2	SOFTWARE	GLY A:110 , LYS A:111 , THR A:112 , LEU A:113 , HOH A:1052	BINDING SITE FOR RESIDUE SO4 A 1011
12	BC3	SOFTWARE	HOH B:1023 , GLY C:110 , LYS C:111 , THR C:112 , LEU C:113 , HOH C:1071	BINDING SITE FOR RESIDUE SO4 C 1012
13	BC4	SOFTWARE	HIS F:137 , GLY H:110 , LYS H:111 , THR H:112 , LEU H:113 , HOH H:1014	BINDING SITE FOR RESIDUE SO4 H 1013
14	BC5	SOFTWARE	GLY F:110 , LYS F:111 , THR F:112 , LEU F:113 , HOH F:1045 , HOH F:1075 , HIS H:137	BINDING SITE FOR RESIDUE SO4 F 1014
15	BC6	SOFTWARE	GLY D:110 , LYS D:111 , THR D:112 , LEU D:113 , HOH D:1055	BINDING SITE FOR RESIDUE SO4 D 1015
16	BC7	SOFTWARE	ARG C:23 , ARG D:23	BINDING SITE FOR RESIDUE SO4 D 1016
17	BC8	SOFTWARE	ARG E:23 , HOH E:1055 , ARG F:23	BINDING SITE FOR RESIDUE SO4 E 1017
18	BC9	SOFTWARE	GLY E:110 , LYS E:111 , THR E:112 , LEU E:113	BINDING SITE FOR RESIDUE SO4 E 1018
19	CC1	SOFTWARE	ASP E:65 , SER E:83 , ASN F:50 , GLY F:57	BINDING SITE FOR RESIDUE SO4 E 1019
20	CC2	SOFTWARE	ASN C:50 , GLY C:57 , ASP D:65 , SER D:83	BINDING SITE FOR RESIDUE SO4 C 1020

(no "SS Bond" information available for 2F0X)

(no "Cis Peptide Bond" information available for 2F0X)

(no "SAP(SNP)/Variant" information available for 2F0X)

(no "PROSITE Motif" information available for 2F0X)

Asymmetric Unit (3, 24)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000230048	1	ENSE00001174688	chr6:24667299-24667572	274	ACO13_HUMAN	1-27	27	8	A:3-27 B:3-27 C:3-27 D:4-27 E:4-27 F:3-27 G:3-27 H:4-27	25 25 25 24 24 25 25 24
1.3	ENST00000230048	3	ENSE00001968027	chr6:24698111-24698295	185	ACO13_HUMAN	28-89	62	8	A:28-89 B:28-89 C:28-89 D:28-89 E:28-89 F:28-89 G:28-89 H:28-89	62 62 62 62 62 62 62 62
1.4	ENST00000230048	4	ENSE00001960410	chr6:24701687-24701942	256	ACO13_HUMAN	89-140	52	8	A:89-138 B:89-138 C:89-138 D:89-138 E:89-138 F:89-138 G:89-138 H:89-138	50 50 50 50 50 50 50 50

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:136
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:136
                                    12        22        32        42        52        62        72        82        92       102       112       122       132      
          ACO13_HUMAN     3 SMTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xa1 A:3-138 Hypothetical protein Them2                                                                                               SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: A:3-27    Exon 1.3  PDB: A:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------Exon 1.4  PDB: A:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x A   3 SmTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                             |      12  |     22        32        42        52        62       |72        82   |    92       102       112       122       132      
                             |         15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                             4-MSE                                                                                 91-MSE

Chain B from PDB  Type:PROTEIN  Length:136
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:136
                                    12        22        32        42        52        62        72        82        92       102       112       122       132      
          ACO13_HUMAN     3 SMTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xb_ B: automated matches                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: B:3-27    Exon 1.3  PDB: B:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------Exon 1.4  PDB: B:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x B   3 SmTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                             |      12  |     22        32        42        52        62       |72        82   |    92       102       112       122       132      
                             4-MSE     15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                                                                                                                   91-MSE

Chain C from PDB  Type:PROTEIN  Length:136
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:136
                                    12        22        32        42        52        62        72        82        92       102       112       122       132      
          ACO13_HUMAN     3 SMTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xc_ C: automated matches                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh...hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: C:3-27    Exon 1.3  PDB: C:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------Exon 1.4  PDB: C:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x C   3 SmTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                             |      12  |     22        32        42        52        62       |72        82   |    92       102       112       122       132      
                             4-MSE     15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                                                                                                                   91-MSE

Chain D from PDB  Type:PROTEIN  Length:135
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:135
                                    13        23        33        43        53        63        73        83        93       103       113       123       133     
          ACO13_HUMAN     4 MTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xd_ D: automated matches                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh...hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: D:4-27   Exon 1.3  PDB: D:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------------------------Exon 1.4  PDB: D:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x D   4 mTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                            |       13 |      23        33        43        53        63      | 73        83  |    |93       103       113       123       133     
                            4-MSE     15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                                                                                                                  91-MSE

Chain E from PDB  Type:PROTEIN  Length:135
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:135
                                    13        23        33        43        53        63        73        83        93       103       113       123       133     
          ACO13_HUMAN     4 MTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xe_ E: automated matches                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh...hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: E:4-27   Exon 1.3  PDB: E:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------------------------Exon 1.4  PDB: E:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x E   4 mTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                            |       13 |      23        33        43        53        63      | 73        83  |    |93       103       113       123       133     
                            4-MSE     15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                                                                                                                  91-MSE

Chain F from PDB  Type:PROTEIN  Length:136
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:136
                                    12        22        32        42        52        62        72        82        92       102       112       122       132      
          ACO13_HUMAN     3 SMTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xf_ F: automated matches                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh.hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: F:3-27    Exon 1.3  PDB: F:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------Exon 1.4  PDB: F:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x F   3 SmTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                             |      12  |     22        32        42        52        62       |72        82   |    92       102       112       122       132      
                             4-MSE     15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                                                                                                                   91-MSE

Chain G from PDB  Type:PROTEIN  Length:136
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:136
                                    12        22        32        42        52        62        72        82        92       102       112       122       132      
          ACO13_HUMAN     3 SMTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xg_ G: automated matches                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh...hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: G:3-27    Exon 1.3  PDB: G:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------Exon 1.4  PDB: G:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x G   3 SmTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                             |      12  |     22        32        42        52        62       |72        82   |    92       102       112       122       132      
                             4-MSE     15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                                                                                                                   91-MSE

Chain H from PDB  Type:PROTEIN  Length:135
 aligned with ACO13_HUMAN | Q9NPJ3 from UniProtKB/Swiss-Prot  Length:140

    Alignment length:135
                                    13        23        33        43        53        63        73        83        93       103       113       123       133     
          ACO13_HUMAN     4 MTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
               SCOP domains d2f0xh_ H: automated matches                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhh.....hhhhhhh..eeeeee..eeeeeee.hhhhh......hhhhhhhhhhhhhhhhhhh.......eeeeeeeee........eeeeeeeeeee...eeeeeeeeee.....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: H:4-27   Exon 1.3  PDB: H:28-89 UniProt: 28-89                         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------------------------Exon 1.4  PDB: H:89-138 UniProt: 89-140            Transcript 1 (2)
                 2f0x H   4 mTQSLREVIKAmTKARNFERVLGKITLVSAAPGKVICEmKVEEEHTNAIGTLHGGLTATLVDNISTmALLCTERGAPGVSVDmNITYmSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHL 138
                            |       13 |      23        33        43        53        63      | 73        83  |    |93       103       113       123       133     
                            4-MSE     15-MSE                     42-MSE                      70-MSE          86-MSE|                                               
                                                                                                                  91-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Thioesterase/thiol ester dehydrase-isomerase (151)

Superfamily: Thioesterase/thiol ester dehydrase-isomerase (151)

Family: PaaI/YdiI-like (44)

Protein domain: automated matches (20)

Human (Homo sapiens) [TaxId: 9606] (2)

1a	d2f0xb_	B:
1b	d2f0xd_	D:
1c	d2f0xe_	E:
1d	d2f0xf_	F:
1e	d2f0xg_	G:
1f	d2f0xh_	H:
1g	d2f0xc_	C:

Protein domain: Hypothetical protein Them2 (3)

Human (Homo sapiens) [TaxId: 9606] (2)

d2f0xa1

A:3-138

(no "CATH Domain" information available for 2F0X)

(no "Pfam Domain" information available for 2F0X)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (ACO13_HUMAN | Q9NPJ3)

molecular function
	GO:0047617	acyl-CoA hydrolase activity	Catalysis of the reaction: acyl-CoA + H2O = CoA + a carboxylate.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
	GO:0035338	long-chain fatty-acyl-CoA biosynthetic process	The chemical reactions and pathways resulting in the formation of a long-chain fatty-acyl-CoA any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. Long-chain fatty-acyl-CoAs have chain lengths of C13 or more.
	GO:0051289	protein homotetramerization	The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0005819	spindle	The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		MSE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2f0x)

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2f0x
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	ACO13_HUMAN \| Q9NPJ3
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	ACO13_HUMAN \| Q9NPJ3
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	ACO13_HUMAN \| Q9NPJ3	:	2h4u 3f5o

(no "Related Entries Specified in the PDB File" available for 2F0X)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 68)

Sites (20, 20)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (3, 24)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 8)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (11, 11)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File