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(-) Description

Title :  RAGWEED POLLEN ALLERGEN FROM AMBROSIA TRIFIDA V, NMR, 30 STRUCTURES
 
Authors :  G. L. Warren, C. J. Tuner, G. A. Petsko, A. T. Brunger
Date :  24 Apr 98  (Deposition) - 17 Jun 98  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (30x)
Keywords :  Protein Allergen, Small Highly Disulfide Bonded (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  G. L. Warren, C. J. Turner, G. A. Petsko, A. T. Brunger
A Highly Precise Solution 1H Nmr Structure Of Ragweed Allergen Amb. T. V
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - POLLEN ALLERGEN 5
    ChainsA
    Organism CommonGIANT RAGWEED
    Organism ScientificAMBROSIA TRIFIDA
    Organism Taxid4214
    Other DetailsPOLLEN

 Structural Features

(-) Chains, Units

  
NMR Structure (30x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2BBG)

(-) Sites  (0, 0)

(no "Site" information available for 2BBG)

(-) SS Bonds  (4, 4)

NMR Structure
No.Residues
1A:5 -A:35
2A:11 -A:26
3A:18 -A:28
4A:19 -A:39

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2BBG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:40
 aligned with MPAT5_AMBTR | P10414 from UniProtKB/Swiss-Prot  Length:73

    Alignment length:40
                                    43        53        63        73
           MPAT5_AMBTR   34 DDGLCYEGTNCGKVGKYCCSPIGKYCVCYDSKAICNKNCT 73
               SCOP domains d2bbga_ A: Amb V allergen                SCOP domains
               CATH domains 2bbgA00 A:1-40                           CATH domains
               Pfam domains ---------------------------------------- Pfam domains
         Sec.struct. author ................eee.......eee..hhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------- PROSITE
                 Transcript ---------------------------------------- Transcript
                  2bbg A  1 DDGLCYEGTNCGKVGKYCCSPIGKYCVCYDSKAICNKNCT 40
                                    10        20        30        40

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2BBG)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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 Related Entries

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UniProtKB/Swiss-Prot
        MPAT5_AMBTR | P104141bbg 3bbg

(-) Related Entries Specified in the PDB File

1bbg