2WOX - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   BETAINE ALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS AERUGINOSA WITH NAD(P)H-CATALYTIC THIOL ADDUCT.

Authors :   L. Gonzalez-Segura, E. Rudino-Pinera, A. G. Diaz-Sanchez, R. A. Munoz

Date :   30 Jul 09 (Deposition) - 25 Aug 10 (Release) - 26 Oct 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Oxidoreductase, Aldehyde Oxidation, Nadph Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. G. Diaz-Sanchez, L. Gonzalez-Segura, E. Rudino-Pinera, A. Lira-Rocha, A. Torres-Larios, R. A. Munoz-Clares
Novel Nadph-Cysteine Covalent Adduct Found In The Active Site Of An Aldehyde Dehydrogenase.
Biochem. J. V. 439 443 2011
PubMed-ID: 21732915 | Reference-DOI: 10.1042/BJ20110376

Molecule 1 - BETAINE ALDEHYDE DEHYDROGENASE
	Chains	:	A, B, C, D
	EC Number	:	1.2.1.8
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PCALBETB
	Expression System Strain	:	BL21(DE3) PLYSS
	Expression System Taxid	:	469008
	Fragment	:	RESIDUES 2-490
	Organism Scientific	:	PSEUDOMONAS AERUGINOSA
	Organism Taxid	:	287
	Synonym	:	BADH

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (5, 35)

No.	Name	Count	Type	Full Name
1	7PE	5	Ligand/Ion	2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL
2	BME	2	Ligand/Ion	BETA-MERCAPTOETHANOL
3	GOL	16	Ligand/Ion	GLYCEROL
4	K	8	Ligand/Ion	POTASSIUM ION
5	NDP	4	Ligand/Ion	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Asymmetric Unit (35, 35)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ILE A:149 , GLY A:150 , TRP A:152 , ASN A:153 , LYS A:176 , SER A:178 , GLU A:179 , SER A:208 , GLY A:209 , GLY A:213 , GLN A:214 , PHE A:227 , THR A:228 , GLY A:229 , GLY A:230 , THR A:233 , VAL A:237 , GLU A:252 , LEU A:253 , GLY A:254 , CYS A:286 , GLU A:387 , PHE A:389 , 7PE A:1496 , HOH A:2223	BINDING SITE FOR RESIDUE NDP A1491
02	AC2	SOFTWARE	THR A:26 , ILE A:27 , ASP A:93 , VAL A:180	BINDING SITE FOR RESIDUE K A1492
03	AC3	SOFTWARE	LYS A:457 , GLY A:460 , LEU B:246 , HOH B:2185	BINDING SITE FOR RESIDUE K A1493
04	AC4	SOFTWARE	TRP A:161 , GLU A:252 , SER A:447 , GLU A:464 , 7PE A:1496	BINDING SITE FOR RESIDUE GOL A1494
05	AC5	SOFTWARE	LEU A:307 , GLN A:311 , LEU A:352 , CYS A:353	BINDING SITE FOR RESIDUE BME A1600
06	AC6	SOFTWARE	ARG B:210 , NDP B:1491	BINDING SITE FOR RESIDUE GOL B1490
07	AC7	SOFTWARE	ILE B:149 , GLY B:150 , TRP B:152 , ASN B:153 , LYS B:176 , SER B:178 , GLU B:179 , GLY B:207 , SER B:208 , GLY B:209 , GLY B:213 , PHE B:227 , THR B:228 , GLY B:229 , GLY B:230 , THR B:233 , GLU B:252 , LEU B:253 , GLY B:254 , CYS B:286 , GLU B:387 , PHE B:389 , LEU B:415 , GOL B:1490 , GOL B:1495 , HOH B:2163 , HOH B:2195 , HOH B:2258 , HOH B:2259 , HOH B:2260	BINDING SITE FOR RESIDUE NDP B1491
08	AC8	SOFTWARE	LEU A:246 , LYS B:457 , GLY B:460	BINDING SITE FOR RESIDUE K B1493
09	AC9	SOFTWARE	TRP B:161 , GLU B:252 , CYS B:286 , SER B:447 , VAL B:453 , GLU B:464 , NDP B:1491 , HOH B:2196	BINDING SITE FOR RESIDUE GOL B1495
10	BC1	SOFTWARE	ALA B:61 , MET B:63 , ALA B:65 , ARG B:68 , HOH B:2262 , HOH B:2263 , HOH B:2264 , HOH B:2265 , HOH D:2106	BINDING SITE FOR RESIDUE GOL B1496
11	BC2	SOFTWARE	PHE B:4 , GLN B:7 , LYS B:187 , GOL B:1498 , HOH B:2002	BINDING SITE FOR RESIDUE GOL B1497
12	BC3	SOFTWARE	GLU B:5 , GLN B:7 , LYS B:8 , TYR B:15 , GOL B:1497	BINDING SITE FOR RESIDUE GOL B1498
13	BC4	SOFTWARE	GLY B:12 , SER B:52 , GLU B:55 , ILE B:71 , GLY B:196 , PRO B:198 , ASP B:199	BINDING SITE FOR RESIDUE 7PE B1499
14	BC5	SOFTWARE	THR B:26 , ILE B:27 , ASP B:93 , VAL B:180	BINDING SITE FOR RESIDUE K B1501
15	BC6	SOFTWARE	ILE C:149 , GLY C:150 , ALA C:151 , TRP C:152 , ASN C:153 , LYS C:176 , SER C:178 , GLU C:179 , SER C:208 , GLY C:209 , ARG C:210 , GLY C:213 , PHE C:227 , THR C:228 , GLY C:229 , GLY C:230 , THR C:233 , LYS C:236 , VAL C:237 , GLU C:252 , LEU C:253 , GLY C:254 , CYS C:286 , GLU C:387 , PHE C:389 , LEU C:415 , GOL C:1497 , HOH C:2352 , HOH C:2353 , HOH C:2354 , HOH C:2355	BINDING SITE FOR RESIDUE NDP C1491
16	BC7	SOFTWARE	THR C:26 , ILE C:27 , ASP C:93 , VAL C:180	BINDING SITE FOR RESIDUE K C1492
17	BC8	SOFTWARE	LYS C:457 , GLY C:460 , LEU D:246 , HOH D:2147	BINDING SITE FOR RESIDUE K C1493
18	BC9	SOFTWARE	PHE C:4 , GLN C:7 , LYS C:187	BINDING SITE FOR RESIDUE GOL C1495
19	CC1	SOFTWARE	TYR C:154 , GLN C:157 , CYS C:286 , GOL C:1497 , GOL C:1499 , HOH C:2356 , HOH C:2357 , HOH C:2358	BINDING SITE FOR RESIDUE GOL C1496
20	CC2	SOFTWARE	TRP C:161 , GLU C:252 , GLU C:464 , NDP C:1491 , GOL C:1496 , HOH C:2338	BINDING SITE FOR RESIDUE GOL C1497
21	CC3	SOFTWARE	ARG C:314 , LEU C:315 , ASP C:320 , THR C:323	BINDING SITE FOR RESIDUE GOL C1498
22	CC4	SOFTWARE	SER C:447 , GOL C:1496 , 7PE C:1501 , HOH C:2128 , HOH C:2360	BINDING SITE FOR RESIDUE GOL C1499
23	CC5	SOFTWARE	SER C:336 , GLY C:339 , TYR C:340	BINDING SITE FOR RESIDUE GOL C1500
24	CC6	SOFTWARE	LEU C:307 , GLN C:311 , LEU C:352 , CYS C:353 , HOH C:2119	BINDING SITE FOR RESIDUE BME C1600
25	CC7	SOFTWARE	ILE D:149 , GLY D:150 , TRP D:152 , ASN D:153 , LYS D:176 , SER D:178 , GLU D:179 , GLY D:207 , GLY D:209 , PHE D:227 , THR D:228 , GLY D:229 , GLY D:230 , THR D:233 , VAL D:237 , GLU D:252 , LEU D:253 , GLY D:254 , CYS D:286 , GLU D:387 , PHE D:389 , LEU D:415 , GOL D:1496 , HOH D:2235	BINDING SITE FOR RESIDUE NDP D1491
26	CC8	SOFTWARE	THR D:26 , ILE D:27 , ASP D:93 , VAL D:180	BINDING SITE FOR RESIDUE K D1492
27	CC9	SOFTWARE	LEU C:246 , HOH C:2203 , LYS D:457 , GLY D:460	BINDING SITE FOR RESIDUE K D1493
28	DC1	SOFTWARE	GLU D:5 , GLU D:6 , GLN D:7 , LYS D:8 , TYR D:15 , GOL D:1497	BINDING SITE FOR RESIDUE GOL D1494
29	DC2	SOFTWARE	GLN D:157 , CYS D:286 , GOL D:1496 , HOH D:2165 , HOH D:2235	BINDING SITE FOR RESIDUE GOL D1495
30	DC3	SOFTWARE	GLU D:252 , CYS D:286 , SER D:447 , NDP D:1491 , GOL D:1495 , HOH D:2165	BINDING SITE FOR RESIDUE GOL D1496
31	DC4	SOFTWARE	PHE D:4 , GLU D:5 , GLN D:7 , LYS D:187 , GOL D:1494	BINDING SITE FOR RESIDUE GOL D1497
32	DC5	SOFTWARE	ALA A:122 , ARG A:140 , ALA A:471 , ALA D:122	BINDING SITE FOR RESIDUE 7PE A1495
33	DC6	SOFTWARE	TYR A:154 , GLN A:157 , TRP A:161 , NDP A:1491 , GOL A:1494 , HOH A:2214 , HOH A:2224	BINDING SITE FOR RESIDUE 7PE A1496
34	DC7	SOFTWARE	GLN B:157 , GLY B:445 , SER B:447	BINDING SITE FOR RESIDUE 7PE B1500
35	DC8	SOFTWARE	MET C:276 , PHE C:280 , THR C:287 , ASN C:288 , TRP C:444 , GLY C:445 , GOL C:1499 , HOH C:2361 , HOH C:2362 , HOH C:2363 , TYR D:486 , ALA D:487 , HOH D:2228	BINDING SITE FOR RESIDUE 7PE C1501

(no "SS Bond" information available for 2WOX)

(no "Cis Peptide Bond" information available for 2WOX)

(no "SAP(SNP)/Variant" information available for 2WOX)

Asymmetric/Biological Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDEHYDE_DEHYDR_GLU	PS00687	Aldehyde dehydrogenases glutamic acid active site.	BETB_PSEAE	251-258	4	A:251-258 B:251-258 C:251-258 D:251-258
2	ALDEHYDE_DEHYDR_CYS	PS00070	Aldehyde dehydrogenases cysteine active site.	BETB_PSEAE	279-290	4	A:279-290 B:279-290 C:279-290 D:279-290

(no "Exon" information available for 2WOX)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:489
 aligned with BETB_PSEAE | Q9HTJ1 from UniProtKB/Swiss-Prot  Length:490

    Alignment length:489
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481         
           BETB_PSEAE     2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
               SCOP domains d2woxa_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 2woxA01 A:2-254 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                                    2woxA02 A:255-448 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                       ------------------------------------------ CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......ee....ee......eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh.eeeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh..eeee......hhhhhhh.....eeee.....hhhhhh.....eeeeeee.hhhhhhhhhhh.....eeeee..hhhhhhhhhh.....eeee..............hhh.ee...hhhhhhhh.eeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE--------------------ALDEHYDE_DEH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wox A   2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481

Chain B from PDB  Type:PROTEIN  Length:489
 aligned with BETB_PSEAE | Q9HTJ1 from UniProtKB/Swiss-Prot  Length:490

    Alignment length:489
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481         
           BETB_PSEAE     2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
               SCOP domains d2woxb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 2woxB01 B:2-254 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                                    2woxB02 B:255-448 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                       ------------------------------------------ CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......ee....ee......eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh.eeeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh..eeee......hhhhhhh.....eeee.....hhhhhh.....eeeeeee.hhhhhhhhhhh.....eeeee..hhhhhhhhhhhh...eeee..............hhh.ee...hhhhhhhh.eeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE--------------------ALDEHYDE_DEH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wox B   2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481

Chain C from PDB  Type:PROTEIN  Length:489
 aligned with BETB_PSEAE | Q9HTJ1 from UniProtKB/Swiss-Prot  Length:490

    Alignment length:489
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481         
           BETB_PSEAE     2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
               SCOP domains d2woxc_ C: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 2woxC01 C:2-254 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                                    2woxC02 C:255-448 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                       ------------------------------------------ CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......ee....ee......eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh.eeeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh..eeee......hhhhhhh.....eeee.....hhhhhh.....eeeeeee.hhhhhhhhhhh.....eeeee..hhhhhhhhhhhh...eeee..............hhh.ee...hhhhhhhh.eeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE--------------------ALDEHYDE_DEH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wox C   2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481

Chain D from PDB  Type:PROTEIN  Length:489
 aligned with BETB_PSEAE | Q9HTJ1 from UniProtKB/Swiss-Prot  Length:490

    Alignment length:489
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481         
           BETB_PSEAE     2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
               SCOP domains d2woxd_ D: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 2woxD01 D:2-254 Aldehyde Dehydrogenase; Chain A, domain 1                                                                                                                                                                                                    2woxD02 D:255-448 Aldehyde Dehydrogenase; Chain A, domain 2                                                                                                                                       ------------------------------------------ CATH domains
           Pfam domains (1) -------------Aldedh-2woxD01 D:15-479                                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------- Pfam domains (1)
           Pfam domains (2) -------------Aldedh-2woxD02 D:15-479                                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------- Pfam domains (2)
           Pfam domains (3) -------------Aldedh-2woxD03 D:15-479                                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------- Pfam domains (3)
           Pfam domains (4) -------------Aldedh-2woxD04 D:15-479                                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------- Pfam domains (4)
         Sec.struct. author .......ee....ee......eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhh.eeeeeee..eeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh.eeeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh..eeee......hhhhhhh.....eeee.....hhhhhh.....eeeeeee.hhhhhhhhhh......eeeee..hhhhhhhhhhhh...eeee..............hhh.ee...hhhhhhhh.eeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE--------------------ALDEHYDE_DEH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2wox D   2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

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Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

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Organisms( (-)

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Class: Alpha and beta proteins (a/b) (23833)

Fold: ALDH-like (168)

Superfamily: ALDH-like (168)

Family: automated matches (88)

Protein domain: automated matches (88)

Pseudomonas aeruginosa [TaxId: 287] (5)

1a	d2woxa_	A:
1b	d2woxb_	B:
1c	d2woxc_	C:
1d	d2woxd_	D:

Asymmetric/Biological Unit

Classes(

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Architectures( (-)

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Topologies( (-)

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Homologous Superfamilies( (-)

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Organisms( (-)

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Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Aldehyde Dehydrogenase; Chain A, domain 1 (86)

Homologous Superfamily: Aldehyde Dehydrogenase; Chain A, domain 1 (86)

Pseudomonas aeruginosa. Organism_taxid: 287. (2)

1a	2woxA01	A:2-254
1b	2woxC01	C:2-254
1c	2woxD01	D:2-254
1d	2woxB01	B:2-254

Topology: Aldehyde Dehydrogenase; Chain A, domain 2 (89)

Homologous Superfamily: Aldehyde Dehydrogenase; Chain A, domain 2 (89)

Pseudomonas aeruginosa. Organism_taxid: 287. (2)

2a	2woxA02	A:255-448
2b	2woxC02	C:255-448
2c	2woxD02	D:255-448
2d	2woxB02	B:255-448

Asymmetric/Biological Unit

Clans(

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Families(

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Organisms( (-)

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Clan: ALDH-like (49)

Family: Aldedh (45)

Pseudomonas aeruginosa (3)

1a	Aldedh-2woxD01	D:15-479
1b	Aldedh-2woxD02	D:15-479
1c	Aldedh-2woxD03	D:15-479
1d	Aldedh-2woxD04	D:15-479

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D (BETB_PSEAE | Q9HTJ1)

molecular function
	GO:0047105	4-trimethylammoniobutyraldehyde dehydrogenase activity	Catalysis of the reaction: NAD+ + 4-trimethylammoniobutanal = NADH + 4-trimethylammoniobutanoate.
	GO:0019145	aminobutyraldehyde dehydrogenase activity	Catalysis of the reaction: 4-aminobutanal + NAD+ + H2O = 4-aminobutanoate + NADH + 2 H+.
	GO:0008802	betaine-aldehyde dehydrogenase activity	Catalysis of the reaction: betaine aldehyde + NAD+ + H2O = betaine + NADH + H+.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
	GO:0019285	glycine betaine biosynthetic process from choline	The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2wox)

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	2wox
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	1.2.1.8
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	BETB_PSEAE \| Q9HTJ1	:	2wme 2xdr 3zqa 4caz 4cbb

2wme	CRYSTALLOGRAPHIC STRUCTURE OF BETAINE ALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS AERUGINOSA
2xdr	CRYSTALLOGRAPHIC STRUCTURE OF BETAINE ALDEHYDE DEHYDROGENASE MUTANT E252A FROM PSEUDOMONAS AERUGINOSA
2xek	CRYSTALLOGRAPHIC STRUCTURE OF BETAINE ALDEHYDE DEHYDROGENASE MUTANT C286A FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH NADPH

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 35)

Sites (35, 35)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 8)

Exons (0, 0)

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SCOP Domains (1, 4)

CATH Domains (2, 8)

Pfam Domains (1, 4)

Gene Ontology (9, 9)

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