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(-) Description

Title :  SOLUTION STRUCTURES OF THE DNA-BINDING DOMAIN (ZF4) OF IMMUNE-RELATED ZINC-FINGER PROTEIN ZFAT
 
Authors :  N. Tochio, T. Umehara, T. Kigawa, S. Yokoyama
Date :  26 Jan 15  (Deposition) - 08 Apr 15  (Release) - 21 Dec 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Zfat, Zinc Finger, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Tochio, T. Umehara, K. Nakabayashi, M. Yoneyama, K. Tsuda, M. Shirouzu, S. Koshiba, S. Watanabe, T. Kigawa, T. Sasazuki, S. Shirasawa, S. Yokoyama
Solution Structures Of The Dna-Binding Domains Of Immune-Related Zinc-Finger Protein Zfat
J. Struct. Funct. Genom. V. 16 55 2015
PubMed-ID: 25801860  |  Reference-DOI: 10.1007/S10969-015-9196-3

(-) Compounds

Molecule 1 - ZINC FINGER PROTEIN ZFAT
    ChainsA
    EngineeredYES
    Expression SystemCELL-FREE SYNTHESIS
    Expression System VectorP061010-09
    Expression System Vector TypeVECTOR
    FragmentUNP RESIDUES 323-353
    GeneZFAT, KIAA1485, ZFAT1, ZNF406
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymZINC FINGER GENE IN AITD SUSCEPTIBILITY REGION, ZINC FINGER PROTEIN 406

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1ZN1Ligand/IonZINC ION
NMR Structure * (0, 0)
No.NameCountTypeFull Name
1ZN-1Ligand/IonZINC ION

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:12 , CYS A:15 , HIS A:28 , HIS A:33BINDING SITE FOR RESIDUE ZN A 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2RUV)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2RUV)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2RUV)

(-) Exons   (0, 0)

(no "Exon" information available for 2RUV)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:37
                                                                    
               SCOP domains ------------------------------------- SCOP domains
               CATH domains ------------------------------------- CATH domains
               Pfam domains ------------------------------------- Pfam domains
         Sec.struct. author .........ee......ee.hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------- PROSITE
                 Transcript ------------------------------------- Transcript
                  2ruv A  1 GSSGSSGEKFACDYCSFTCLSKGHLKVHIERVHKKIK 37
                                    10        20        30       

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2RUV)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2RUV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2RUV)

(-) Gene Ontology  (17, 17)

NMR Structure(hide GO term definitions)

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  ZFAT_HUMAN | Q9P243
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ZFAT_HUMAN | Q9P2432elm 2eln 2elo 2elp 2elq 2elr 2els 2elt 2elu 2elv 2rsh 2rsi 2rsj 2rut 2ruu 2ruw 2rux 2ruy 2ruz 2rv0 2rv1 2rv2 2rv3 2rv6 2rv7

(-) Related Entries Specified in the PDB File

2rsh BMRB ENTRY TRACKING SYSTEM RELATED ID: 11486 RELATED DB: BMRB
2rut
2ruu
2ruw
2rux
2ruy
2ruz
2rv0
2rv1
2rv2
2rv3
2rv4
2rv5
2rv6
2rv7