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(-) Description

Title :  3IG STRUCTURE OF TITIN DOMAINS I67-I69 E-TO-A MUTATED VARIANT
 
Authors :  E. Von Castelmur, M. Marino, D. Labeit, S. Labeit, O. Mayans
Date :  15 Oct 07  (Deposition) - 22 Jan 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Ig I-Set, Extended Poly-Ig Filament, Titin, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Von Castelmur, M. Marino, D. I. Svergun, L. Kreplak, Z. Ucurum-Fotiadis, P. V. Konarev, A. Urzhumtsev, D. Labeit, S. Labeit, O. Mayans
A Regular Pattern Of Ig Super-Motifs Defines Segmental Flexibility As The Elastic Mechanism Of The Titin Chain
Proc. Natl. Acad. Sci. Usa V. 105 1186 2008
PubMed-ID: 18212128  |  Reference-DOI: 10.1073/PNAS.0707163105
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - TITIN
    Chains: A
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETM-11
    Expression System Strain: BL21 (DE3) ROSETTA
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: I67-I69
    Mutation: YES
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2RJM)

(-) Sites  (0, 0)

(no "Site" information available for 2RJM)

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:210 -A:272

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Ala A:29 -Pro A:30
2Pro A:123 -Glu A:124
3Pro A:216 -Pro A:217

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2RJM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2RJM)

(-) Exons   (0, 0)

(no "Exon" information available for 2RJM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:283
 aligned with O97791_RABIT | O97791 from UniProtKB/TrEMBL  Length:2000

    Alignment length:444
                                   906       916       926       936       946       956       966       976       986       996      1006      1016      1026      1036      1046      1056      1066      1076      1086      1096      1106      1116      1126      1136      1146      1156      1166      1176      1186      1196      1206      1216      1226      1236      1246      1256      1266      1276      1286      1296      1306      1316      1326      1336    
        O97791_RABIT    897 PVTPPTLVSGLKNMTVIEGESVTLECHISGYPSPTVTWYREDYQIESSIDFQITFQSGIARLMIREAFAEDRGRFTCSAVNEAGTVSTSCYLAVQVSEEFEKETTVAEKLTTEEKRFVESRDVVMTDTTITEEQAMPGEPAAPFFITKPVVQKLVEGGSVVFECQIGGNPKPHVYWKKSGVPLTTGYRYKVSYNKQTGECKLVISMTFADDAGEYTIVIRNKHGETSASASLLEEAEYESLMKSQQEMLYQTQMTAFVQEPKVGEIAPGFVYSEYEKEYEKEQALIRKKMAKDTVMVRTFVEDQEFHISSFEERLIKEIEYRIIKTTLEELLEEDGEEKMAVDISESEAIESGFELRIKNYRILEGMGVTFHCKMSGYPLPKIAWYKDGKRIKPGERYQMDFLQDGRASLRIPVVLPEDEGIYTAFASNIKGNAICSGKLYVEP 1340
               SCOP domains d2rjma1 A:-2-92 automated matches                                                              d2rjma2 A:93-186 au                                            tomated matches                                                                                      d2rjma3 A                              :187-                                                            280 automated matches                                                             SCOP domains
               CATH domains 2rjmA01 A:-2-93 Immunoglobulins                                                                 2rjmA02 A:94-188 I                                            mmunoglobulins                                                                                         2rjmA03                               A:18                                                            9-280 Immunoglobulins                                                             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee....eeee....eeeeeeee.....eeeeee..ee......eeeeee..eeeeee...hhhhheeeeeeeee..eeeeeeeeeeee...eeee....eeeee...--------------------------------------------.eeeeeeee.....eeeeee..ee......eeeeee..eeeeee..--.hhhhheeeeeeee....eeeeeeeee------------------------ee.........------------------------------..eee------------------------------------------------------------.....eeeeee.......eeeeee..eee.....eee-eee..eeeeee...hhhhheeeeeeeee..eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                2rjm A   -2 AMAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQAPPRFIKKLEPSRIVKQDE--------------------------------------------HTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYN--LSVEDSGDYTCEAHNAAGSASSSTSLK------------------------VKEPPVFRKKP------------------------------HPVET------------------------------------------------------------LKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKI-MSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA  280
                                     7        17        27        37        47        57        67        77        87        97       107   |     -         -         -         -       113       123       133       143       153   |  |161       171       181  |      -         -       187       | -         -         -       197  |      -         -         -         -         -         -   |   207       217       227       237 |     246       256       266       276    
                                                                                                                                           111                                          112                                          157  |                       184                      185       195                            196 200                                                          201                                 237 |                                          
                                                                                                                                                                                                                                        158                                                                                                                                                                                                238
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 3)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 3)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2RJM)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (O97791_RABIT | O97791)
molecular function
    GO:0031433    telethonin binding    Interacting selectively and non-covalently with telethonin, a protein found in the Z disc of striated muscle and which is a substrate of the titin kinase.

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  Cis Peptide Bonds
    Ala A:29 - Pro A:30   [ RasMol ]  
    Pro A:123 - Glu A:124   [ RasMol ]  
    Pro A:216 - Pro A:217   [ RasMol ]  
 

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  2rjm
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  2.7.11.1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        O97791_RABIT | O97791: 1h8b 2rik

(-) Related Entries Specified in the PDB File

2rik 3IG STRUCTURE OF TITIN DOMAINS I67-I69
3b43