Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Biol.Unit 1 - manually
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
collapse expand < >
Image Biol.Unit 1 - manually
Biol.Unit 1 - manually  (Jmol Viewer)
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)

(-) Description

Title :  T-LIKE FRUCTOSE-1,6-BISPHOSPHATASE FROM ESCHERICHIA COLI WITH AMP, GLUCOSE 6-PHOSPHATE, AND FRUCTOSE 1,6-BISPHOSPHATE BOUND
 
Authors :  J. K. Hines, C. E. Kruesel, H. J. Fromm, R. B. Honzatko
Date :  11 Jun 07  (Deposition) - 19 Jun 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Glycolysis, Gluconeogenesis, Bacteria, Carbohydrate Metabolism, Diabetes, Protein-Protein Interactions, Proteobacteria, Gram- Negative, Protein Crystallography, Heterotrophic, Allosteric Regulation, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. K. Hines, C. E. Kruesel, H. J. Fromm, R. B. Honzatko
Structure Of Inhibited Fructose-1, 6-Bisphosphatase From Escherichia Coli: Distinct Allosteric Inhibition Sites For Amp And Glucose 6-Phosphate And The Characterization Of A Gluconeogenic Switch.
J. Biol. Chem. V. 282 24697 2007
PubMed-ID: 17567577  |  Reference-DOI: 10.1074/JBC.M703580200

(-) Compounds

Molecule 1 - FRUCTOSE-BISPHOSPHATASE
    ChainsA, B
    EC Number3.1.3.11
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET-24B
    Expression System StrainDF657
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneFBP
    Organism ScientificSHIGELLA BOYDII
    Organism Taxid621
    StrainXL1-BLUE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (2x)AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 24)

Asymmetric Unit (6, 24)
No.NameCountTypeFull Name
1AMP2Ligand/IonADENOSINE MONOPHOSPHATE
2BG61Ligand/IonBETA-D-GLUCOSE-6-PHOSPHATE
3CL3Ligand/IonCHLORIDE ION
4FBP2Ligand/IonBETA-FRUCTOSE-1,6-DIPHOSPHATE
5MG4Ligand/IonMAGNESIUM ION
6MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (4, 34)
No.NameCountTypeFull Name
1AMP4Ligand/IonADENOSINE MONOPHOSPHATE
2BG62Ligand/IonBETA-D-GLUCOSE-6-PHOSPHATE
3CL-1Ligand/IonCHLORIDE ION
4FBP4Ligand/IonBETA-FRUCTOSE-1,6-DIPHOSPHATE
5MG-1Ligand/IonMAGNESIUM ION
6MSE24Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:207 , TYR A:210 , ILE A:221 , LYS A:222 , GLN A:225 , HOH A:390 , HOH A:471 , HOH A:503 , HOH A:514 , GLU B:207 , TYR B:210 , ILE B:221 , LYS B:222 , GLN B:225 , HOH B:495BINDING SITE FOR RESIDUE BG6 A 340
02AC2SOFTWAREARG A:238 , GLU B:89 , ASP B:110 , LEU B:112 , ASP B:113 , GLY B:114 , SER B:115 , ASN B:206 , TYR B:239 , GLY B:241 , LEU B:243 , TYR B:257 , TYR B:259 , LYS B:269 , GLU B:275 , MG B:345 , MG B:346 , HOH B:458 , HOH B:484 , HOH B:485 , HOH B:563 , HOH B:630 , HOH B:658BINDING SITE FOR RESIDUE FBP B 342
03AC3SOFTWAREGLU A:89 , ASP A:110 , LEU A:112 , ASP A:113 , GLY A:114 , SER A:115 , ASN A:206 , TYR A:239 , GLY A:241 , LEU A:243 , TYR A:257 , TYR A:259 , LYS A:269 , GLU A:275 , MG A:347 , MG A:348 , HOH A:385 , HOH A:451 , HOH A:527 , HOH A:552 , HOH A:583 , HOH A:660 , ARG B:238BINDING SITE FOR RESIDUE FBP A 344
04AC4SOFTWAREGLU B:89 , ASP B:110 , LEU B:112 , FBP B:342 , HOH B:490 , HOH B:657BINDING SITE FOR RESIDUE MG B 345
05AC5SOFTWAREASP B:110 , ASP B:113 , GLU B:275 , FBP B:342BINDING SITE FOR RESIDUE MG B 346
06AC6SOFTWAREGLU A:89 , ASP A:110 , LEU A:112 , FBP A:344 , HOH A:659 , HOH A:660BINDING SITE FOR RESIDUE MG A 347
07AC7SOFTWAREASP A:110 , ASP A:113 , GLU A:275 , FBP A:344BINDING SITE FOR RESIDUE MG A 348
08AC8SOFTWARELYS B:30 , PHE B:187BINDING SITE FOR RESIDUE CL B 349
09AC9SOFTWAREGLY A:5 , LYS A:30 , VAL A:186 , PHE A:187BINDING SITE FOR RESIDUE CL A 350
10BC1SOFTWARELYS A:30 , LYS B:30BINDING SITE FOR RESIDUE CL A 351
11BC2SOFTWAREILE A:8 , LYS A:11 , GLN A:12 , PHE A:15 , ALA A:18 , THR A:19 , GLY A:20 , GLU A:21 , LEU A:22 , THR A:23 , LYS A:104 , TYR A:105 , ARG A:132 , HOH A:352 , HOH A:357 , HOH A:494 , HOH A:555 , HOH A:663BINDING SITE FOR RESIDUE AMP A 341
12BC3SOFTWAREVAL A:137 , ILE B:8 , LYS B:11 , GLN B:12 , PHE B:15 , ALA B:18 , THR B:19 , GLY B:20 , GLU B:21 , LEU B:22 , THR B:23 , LYS B:104 , TYR B:105 , ARG B:132 , HOH B:428 , HOH B:460 , HOH B:465 , HOH B:512 , HOH B:518 , HOH B:638BINDING SITE FOR RESIDUE AMP B 343

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Q8M)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Arg A:233 -Pro A:234
2Arg B:233 -Pro B:234

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Q8M)

(-) PROSITE Motifs  (1, 2)

Asymmetric Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FBPASEPS00124 Fructose-1-6-bisphosphatase active site.F16PA_SHIBS268-280
 
  2A:268-280
B:268-280
F16PA_ECOLI268-280
 
  2A:268-280
B:268-280
Biological Unit 1 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FBPASEPS00124 Fructose-1-6-bisphosphatase active site.F16PA_SHIBS268-280
 
  4A:268-280
B:268-280
F16PA_ECOLI268-280
 
  4A:268-280
B:268-280

(-) Exons   (0, 0)

(no "Exon" information available for 2Q8M)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:310
 aligned with F16PA_ECOLI | P0A993 from UniProtKB/Swiss-Prot  Length:332

    Alignment length:332
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330  
          F16PA_ECOLI     1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA 332
               SCOP domains d2q8ma_ A: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -2q8mA01 A:2-193 Fructose-1,6-Bisphosphatase,                       subunit A, domain 1                                                                                                          -2q8mA02 A:195-332  [code=3.40.190.80, no name defined]                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh....----------------------hhhhhhhhhhhh.....eeee......ee........eeeeeeeeehhhhhhhh..eeeeeeeee.........hhhhhh.hhhhh.eeeeeee...eeeeee....eeeeee......eeeeeeee.......eee.hhhhhhhhhhhhhhhhhhhhh.hhhhh...ee....hhhhhhhhhhhhh.eeee...............hhhhhhhhhhhh..eee....hhhhh..........eeeehhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FBPASE       ---------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q8m A   1 mKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGL----------------------FANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLmDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTmLVYTTGCGVHAFTYDPSLGVFCLCQERmRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPmAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHmVEDVERFIREFPDA 332
                            |       10        20        30        40    |    -         -       |70        80        90       100       110       120       130       140       150       160     | 170       180       190   |   200       210       220       230       240       250       260       270       280       290       300       310       320       330  
                            |                                          45                     68                                      109-MSE                                                  166-MSE                     194-MSE                                                                              279-MSE                                318-MSE          
                            1-MSE                                                                                                                                                                                                                                                                                                                                       

Chain A from PDB  Type:PROTEIN  Length:310
 aligned with F16PA_SHIBS | Q31TG8 from UniProtKB/Swiss-Prot  Length:332

    Alignment length:332
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330  
          F16PA_SHIBS     1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA 332
               SCOP domains d2q8ma_ A: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -2q8mA01 A:2-193 Fructose-1,6-Bisphosphatase,                       subunit A, domain 1                                                                                                          -2q8mA02 A:195-332  [code=3.40.190.80, no name defined]                                                                                     CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh....----------------------hhhhhhhhhhhh.....eeee......ee........eeeeeeeeehhhhhhhh..eeeeeeeee.........hhhhhh.hhhhh.eeeeeee...eeeeee....eeeeee......eeeeeeee.......eee.hhhhhhhhhhhhhhhhhhhhh.hhhhh...ee....hhhhhhhhhhhhh.eeee...............hhhhhhhhhhhh..eee....hhhhh..........eeeehhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FBPASE       ---------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q8m A   1 mKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGL----------------------FANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLmDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTmLVYTTGCGVHAFTYDPSLGVFCLCQERmRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPmAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHmVEDVERFIREFPDA 332
                            |       10        20        30        40    |    -         -       |70        80        90       100       110       120       130       140       150       160     | 170       180       190   |   200       210       220       230       240       250       260       270       280       290       300       310       320       330  
                            1-MSE                                      45                     68                                      109-MSE                                                  166-MSE                     194-MSE                                                                              279-MSE                                318-MSE          

Chain B from PDB  Type:PROTEIN  Length:310
 aligned with F16PA_ECOLI | P0A993 from UniProtKB/Swiss-Prot  Length:332

    Alignment length:332
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330  
          F16PA_ECOLI     1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA 332
               SCOP domains d2q8mb_ B: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -2q8mB01 B:2-193 Fructose-1,6-Bisphosphatase,                       subunit A, domain 1                                                                                                          -2q8mB02 B:195-332  [code=3.40.190.80, no name defined]                                                                                     CATH domains
           Pfam domains (1) -FBPase-2q8mB01 B:2-329                                                                                                                                                                                                                                                                                                                  --- Pfam domains (1)
           Pfam domains (2) -FBPase-2q8mB02 B:2-329                                                                                                                                                                                                                                                                                                                  --- Pfam domains (2)
         Sec.struct. author ..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh...----------------------hhhhhhhhhhhhh....eeeeee..eeeeee......eeeeeeeeehhhhhhhh..eeeeeeeee.........hhhhh..hhh.eeeeeeeee...eeeeee.....eeeeee....eeeeee..........eee.hhhhhhhhhhhhhhhhhhhhh.hhhhh...ee....hhhhhhhhhhhhh.eeee...............hhhhhhhhhhhh..eee....hhhhh..........eeeehhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FBPASE       ---------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q8m B   1 mKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGL----------------------FANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLmDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTmLVYTTGCGVHAFTYDPSLGVFCLCQERmRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPmAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHmVEDVERFIREFPDA 332
                            |       10        20        30        40    |    -         -       |70        80        90       100       110       120       130       140       150       160     | 170       180       190   |   200       210       220       230       240       250       260       270       280       290       300       310       320       330  
                            1-MSE                                      45                     68                                      109-MSE                                                  166-MSE                     194-MSE                                                                              279-MSE                                318-MSE          

Chain B from PDB  Type:PROTEIN  Length:310
 aligned with F16PA_SHIBS | Q31TG8 from UniProtKB/Swiss-Prot  Length:332

    Alignment length:332
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330  
          F16PA_SHIBS     1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA 332
               SCOP domains d2q8mb_ B: Fructose-1,6-bisphosphatase                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains -2q8mB01 B:2-193 Fructose-1,6-Bisphosphatase,                       subunit A, domain 1                                                                                                          -2q8mB02 B:195-332  [code=3.40.190.80, no name defined]                                                                                     CATH domains
           Pfam domains (1) -FBPase-2q8mB01 B:2-329                                                                                                                                                                                                                                                                                                                  --- Pfam domains (1)
           Pfam domains (2) -FBPase-2q8mB02 B:2-329                                                                                                                                                                                                                                                                                                                  --- Pfam domains (2)
         Sec.struct. author ..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh...----------------------hhhhhhhhhhhhh....eeeeee..eeeeee......eeeeeeeeehhhhhhhh..eeeeeeeee.........hhhhh..hhh.eeeeeeeee...eeeeee.....eeeeee....eeeeee..........eee.hhhhhhhhhhhhhhhhhhhhh.hhhhh...ee....hhhhhhhhhhhhh.eeee...............hhhhhhhhhhhh..eee....hhhhh..........eeeehhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FBPASE       ---------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2q8m B   1 mKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGL----------------------FANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLmDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTmLVYTTGCGVHAFTYDPSLGVFCLCQERmRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPmAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHmVEDVERFIREFPDA 332
                            |       10        20        30        40    |    -         -       |70        80        90       100       110       120       130       140       150       160     | 170       180       190   |   200       210       220       230       240       250       260       270       280       290       300       310       320       330  
                            1-MSE                                      45                     68                                      109-MSE                                                  166-MSE                     194-MSE                                                                              279-MSE                                318-MSE          

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (2, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 2)

Asymmetric Unit

(-) Gene Ontology  (15, 25)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (F16PA_SHIBS | Q31TG8)
molecular function
    GO:0042132    fructose 1,6-bisphosphate 1-phosphatase activity    Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0042578    phosphoric ester hydrolase activity    Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
biological process
    GO:0016051    carbohydrate biosynthetic process    The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0016311    dephosphorylation    The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
    GO:0006094    gluconeogenesis    The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B   (F16PA_ECOLI | P0A993)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0042132    fructose 1,6-bisphosphate 1-phosphatase activity    Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0042578    phosphoric ester hydrolase activity    Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
biological process
    GO:0016051    carbohydrate biosynthetic process    The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0016311    dephosphorylation    The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
    GO:0006094    gluconeogenesis    The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0051289    protein homotetramerization    The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    AMP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    BG6  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FBP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MSE  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Arg A:233 - Pro A:234   [ RasMol ]  
    Arg B:233 - Pro B:234   [ RasMol ]  
 
Biological Unit
  Complete Structure
    Biological Unit 1  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2q8m
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  F16PA_ECOLI | P0A993
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
  F16PA_SHIBS | Q31TG8
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.1.3.11
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  F16PA_ECOLI | P0A993
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  F16PA_SHIBS | Q31TG8
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        F16PA_ECOLI | P0A9932gq1 2owz 2ox3 2qvr

(-) Related Entries Specified in the PDB File

2gq1 2owz 2ox3