Chain A from PDB Type:PROTEIN Length:102
aligned with DBH_BORBU | Q57267 from UniProtKB/Swiss-Prot Length:108
Alignment length:102
15 25 35 45 55 65 75 85 95 105
DBH_BORBU 6 RPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
SCOP domains d2np2a_ A: automated matches SCOP domains
CATH domains 2np2A00 A:6-107 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeehhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh..eeee...eeeeeeee...................eeeeeeeehhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---I---------A---R---------C-------------------------------L---R-----------V-------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------HISTONE_LIKE ---------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------ Transcript
2np2 A 6 RPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
15 25 35 45 55 65 75 85 95 105
Chain A from PDB Type:PROTEIN Length:102
aligned with Q3I4Z2_BORBG | Q3I4Z2 from UniProtKB/TrEMBL Length:108
Alignment length:102
15 25 35 45 55 65 75 85 95 105
Q3I4Z2_BORBG 6 RPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
SCOP domains d2np2a_ A: automated matches SCOP domains
CATH domains 2np2A00 A:6-107 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeehhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh..eeee...eeeeeeee...................eeeeeeeehhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---I---------A---R---------C-------------------------------L---R-----------V-------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------ Transcript
2np2 A 6 RPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
15 25 35 45 55 65 75 85 95 105
Chain B from PDB Type:PROTEIN Length:102
aligned with DBH_BORBU | Q57267 from UniProtKB/Swiss-Prot Length:108
Alignment length:102
15 25 35 45 55 65 75 85 95 105
DBH_BORBU 6 RPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
SCOP domains d2np2b_ B: automated matches SCOP domains
CATH domains 2np2B00 B:6-107 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeehhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh..eeee...eeeeeeee...................eeeeeeeehhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---I---------A---R---------C-------------------------------L---R-----------V-------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------HISTONE_LIKE ---------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------ Transcript
2np2 B 6 RPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
15 25 35 45 55 65 75 85 95 105
Chain B from PDB Type:PROTEIN Length:102
aligned with Q3I4Z2_BORBG | Q3I4Z2 from UniProtKB/TrEMBL Length:108
Alignment length:102
15 25 35 45 55 65 75 85 95 105
Q3I4Z2_BORBG 6 RPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
SCOP domains d2np2b_ B: automated matches SCOP domains
CATH domains 2np2B00 B:6-107 HU Protein, subunit A CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeehhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh..eeee...eeeeeeee...................eeeeeeeehhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ---I---------A---R---------C-------------------------------L---R-----------V-------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------ Transcript
2np2 B 6 RPKVTKSDIVDQIALNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSFGTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIK 107
15 25 35 45 55 65 75 85 95 105
Chain C from PDB Type:DNA Length:36
2np2 C 203 GTATTTAATACTATATGTCATATAGTATTAAATACT 238
212 222 232
Chain D from PDB Type:DNA Length:36
2np2 D 203 GTATTTAATACTATATGTCATATAGTATTAAATACT 238
212 222 232
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |