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(-) Description

Title :  RECOGNITION COMPLEX OF DNA D(CGACGCGTCG)2 WITH THIAZOTROPSIN B
 
Authors :  H. Y. Alniss, M. -V. Salvia, M. Sadikov, I. Golovchenko, N. G. Anthony, A. I. Khalaf, S. P. Mackay, C. J. Suckling, J. A. Parkinson
Date :  03 Apr 14  (Deposition) - 30 Jul 14  (Release) - 17 Sep 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B
NMR Structure *:  A,B  (1x)
Keywords :  Thiazotropsins, Dna Recognition, Isothermal Titration Calorimetry Nmr, Self-Assembly, Minor Groove Binder, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  H. Y. Alniss, M. V. Salvia, M. Sadikov, I. Golovchenko, N. G. Anthony, A. I. Khalaf, S. P. Mackay, C. J. Suckling, J. A. Parkinson
Recognition Of The Dna Minor Groove By Thiazotropsin Analogues.
Chembiochem V. 15 1978 2014
PubMed-ID: 25045155  |  Reference-DOI: 10.1002/CBIC.201402202

(-) Compounds

Molecule 1 - 5'-D(*CP*GP*AP*CP*GP*CP*GP*TP*CP*G)-3'
    ChainsA, B
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
NMR Structure AB
NMR Structure * (1x)AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
13BF2Ligand/IonTHIAZOTROPSIN B
NMR Structure * (1, 2)
No.NameCountTypeFull Name
13BF2Ligand/IonTHIAZOTROPSIN B

(-) Sites  (2, 2)

NMR Structure (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDG A:5 , DC A:6 , DG A:7 , DT A:8 , DC A:9 , 3BF B:101BINDING SITE FOR RESIDUE 3BF A 101
2AC2SOFTWAREDC A:4 , 3BF A:101 , DC B:14 , DG B:15 , DC B:16 , DG B:17 , DT B:18 , DC B:19BINDING SITE FOR RESIDUE 3BF B 101

(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:10
                                         
                  2mnd A  1 CGACGCGTCG 10
                                    10

Chain B from PDB  Type:DNA  Length:10
                                         
                  2mnd B 11 CGACGCGTCG 20
                                    20

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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(-) Related Entries Specified in the PDB File

2mne 2mnf