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(-) Description

Title :  RBPMS2-NTER
 
Authors :  Y. Yang
Date :  12 Jun 13  (Deposition) - 15 Oct 14  (Release) - 15 Oct 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (15x)
NMR Structure *:  A,B  (1x)
Keywords :  Rbpms2, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Sagnol, Y. Yang, Y. Bessin, F. Allemand, I. Hapkova, C. Notarnicola J. F. Guichou, S. Faure, G. Labesse, P. De Santa Barbara
Homodimerization Of Rbpms2 Through A New Rrm-Interaction Motif Is Necessary To Control Smooth Muscle Plasticity.
Nucleic Acids Res. V. 42 10173 2014
PubMed-ID: 25064856  |  Reference-DOI: 10.1093/NAR/GKU692

(-) Compounds

Molecule 1 - RNA-BINDING PROTEIN WITH MULTIPLE SPLICING 2
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentN-TERMINAL DOMAIN (UNP RESIDUES 27-117)
    GeneRBPMS2
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

  12
NMR Structure (15x)AB
NMR Structure * (1x)AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2M9K)

(-) Sites  (0, 0)

(no "Site" information available for 2M9K)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2M9K)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2M9K)

(-) PROSITE Motifs  (1, 2)

NMR Structure (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.RBPS2_HUMAN31-108
 
  2A:31-108
B:31-108
NMR Structure * (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.RBPS2_HUMAN31-108
 
  2A:31-108
B:31-108

(-) Exons   (0, 0)

(no "Exon" information available for 2M9K)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:93
 aligned with RBPS2_HUMAN | Q6ZRY4 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:93
                                    35        45        55        65        75        85        95       105       115   
          RBPS2_HUMAN    26 LEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLM 118
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee......hhhhhhhhhh....eeeeeee......eeeeee.hhhhhhhhhhhhh.ee.......eeeeee............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----RRM  PDB: A:31-108 UniProt: 31-108                                            ---------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                 2m9k A  26 MEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLE 118
                                    35        45        55        65        75        85        95       105       115   

Chain B from PDB  Type:PROTEIN  Length:93
 aligned with RBPS2_HUMAN | Q6ZRY4 from UniProtKB/Swiss-Prot  Length:209

    Alignment length:93
                                    35        45        55        65        75        85        95       105       115   
          RBPS2_HUMAN    26 LEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLM 118
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee......hhhhhhhhhh....eeeeeeee....eeeeeee.hhhhhhhhhhhhh.ee.......eeeeee............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----RRM  PDB: B:31-108 UniProt: 31-108                                            ---------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                 2m9k B  26 MEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLE 118
                                    35        45        55        65        75        85        95       105       115   

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2M9K)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2M9K)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A,B   (RBPS2_HUMAN | Q6ZRY4)
molecular function
    GO:0003676    nucleic acid binding    Interacting selectively and non-covalently with any nucleic acid.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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