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(-) Description

Title :  CRYSTAL STRUCTURE OF P14 ALANINE VARIANT OF ANTITHROMBIN
 
Authors :  S. A. Luis, S. C. Bock, J. A. Huntington
Date :  29 Jun 06  (Deposition) - 19 Jun 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym. Unit :  I,L
Biol. Unit 1:  I  (1x)
Biol. Unit 2:  L  (1x)
Keywords :  Thrombin, Inhibition, Heparin Analogue, Serine Protease 2 Inhibitor, Blood Clotting- Hydrolase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  
Crystal Structure Of P14 Alanine Variant Of Antithrombin
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ANTITHROMBIN-III
    ChainsI
    EngineeredYES
    Expression SystemDROSOPHILA MELANOGASTER
    Expression System CommonFRUIT FLY
    Expression System Taxid7227
    GeneSERPINC1, AT3
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymATIII
 
Molecule 2 - ANTITHROMBIN-III
    ChainsL
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsALPHA GLYCOFORM, PLASMA ALPHA ANTITHROMBIN WAS CONVERTED TO LATENT BY THE GLYCEROL METHOD
    SynonymATIII

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit IL
Biological Unit 1 (1x)I 
Biological Unit 2 (1x) L

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 11)

Asymmetric Unit (3, 11)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2MAN1Ligand/IonALPHA-D-MANNOSE
3NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (3, 7)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2MAN1Ligand/IonALPHA-D-MANNOSE
3NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2MAN-1Ligand/IonALPHA-D-MANNOSE
3NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREMET I:20 , ASN I:96 , LYS I:350 , NAG I:802BINDING SITE FOR RESIDUE NAG I 801
02AC2SOFTWARENAG I:801 , MAN I:803BINDING SITE FOR RESIDUE NAG I 802
03AC3SOFTWARENAG I:802BINDING SITE FOR RESIDUE MAN I 803
04AC4SOFTWAREASN I:155 , GLU I:156 , THR I:157 , PRO I:352BINDING SITE FOR RESIDUE NAG I 841
05AC5SOFTWAREASN I:192 , NAG I:862BINDING SITE FOR RESIDUE NAG I 861
06AC6SOFTWARENAG I:861BINDING SITE FOR RESIDUE NAG I 862
07AC7SOFTWARECYS L:95 , ASN L:96BINDING SITE FOR RESIDUE NAG L 801
08AC8SOFTWAREASN L:18 , MET L:20 , ASN L:155 , THR L:157 , ALA L:356BINDING SITE FOR RESIDUE NAG L 841
09AC9SOFTWAREASN L:192 , GLU L:195BINDING SITE FOR RESIDUE NAG L 861
10BC1SOFTWARESER I:56 , LEU I:304 , ARG I:413 , ASN I:418BINDING SITE FOR RESIDUE GOL I 863
11BC2SOFTWAREARG I:47 , TRP I:49 , PHE I:122 , ARG L:261 , VAL L:263 , ALA L:264 , GLU L:310BINDING SITE FOR RESIDUE GOL L 862

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1I:8 -I:128
2I:21 -I:95
3I:247 -I:430
4L:8 -L:128
5L:21 -L:95
6L:247 -L:430

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2HIJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (85, 167)

Asymmetric Unit (85, 167)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_007033I39NANT3_HUMANDisease (AT3D)28929468I/LI7N
02UniProtVAR_007034M52TANT3_HUMANUnclassified  ---I/LM20T
03UniProtVAR_071199C53FANT3_HUMANDisease (AT3D)  ---I/LC21F
04UniProtVAR_007035R56CANT3_HUMANDisease (AT3D)28929469I/LR24C
05UniProtVAR_007037R79CANT3_HUMANDisease (AT3D)121909547I/LR47C
06UniProtVAR_007038R79HANT3_HUMANDisease (AT3D)121909552I/LR47H
07UniProtVAR_007039R79SANT3_HUMANDisease (AT3D)121909547I/LR47S
08UniProtVAR_007041R89CANT3_HUMANDisease (AT3D)147266200I/LR57C
09UniProtVAR_007042F90LANT3_HUMANDisease (AT3D)  ---I/LF58L
10UniProtVAR_027452Y95CANT3_HUMANDisease (AT3D)  ---I/LY63C
11UniProtVAR_012316Y95SANT3_HUMANDisease (AT3D)  ---I/LY63S
12UniProtVAR_027453L98PANT3_HUMANDisease (AT3D)  ---I/LL66P
13UniProtVAR_007044P112TANT3_HUMANDisease (AT3D)  ---I/LP80T
14UniProtVAR_027454M121KANT3_HUMANDisease (AT3D)  ---I/LM89K
15UniProtVAR_071200G125DANT3_HUMANDisease (AT3D)  ---I/LG93D
16UniProtVAR_027455C127RANT3_HUMANDisease (AT3D)121909573I/LC95R
17UniProtVAR_007045L131FANT3_HUMANDisease (AT3D)121909567I/LL99F
18UniProtVAR_007046L131VANT3_HUMANDisease (AT3D)  ---I/LL99V
19UniProtVAR_007047Q133KANT3_HUMANDisease (AT3D)  ---I/LQ101K
20UniProtVAR_027456K146EANT3_HUMANDisease (AT3D)  ---I/LK114E
21UniProtVAR_013085T147AANT3_HUMANPolymorphism2227606I/LT115A
22UniProtVAR_007049S148PANT3_HUMANDisease (AT3D)121909569I/LS116P
23UniProtVAR_007050Q150PANT3_HUMANDisease (AT3D)765445413I/LQ118P
24UniProtVAR_007051H152YANT3_HUMANDisease (AT3D)  ---I/LH120Y
25UniProtVAR_007053L158PANT3_HUMANDisease (AT3D)  ---I/LL126P
26UniProtVAR_027457C160YANT3_HUMANDisease (AT3D)  ---I/LC128Y
27UniProtVAR_007054R161QANT3_HUMANDisease (AT3D)121909563I/LR129Q
28UniProtVAR_012750N167TANT3_HUMANPolymorphism121909570I/LA135T
29UniProtVAR_071201S170PANT3_HUMANDisease (AT3D)  ---I/LS138P
30UniProtVAR_027458L178HANT3_HUMANDisease (AT3D)  ---I/LL146H
31UniProtVAR_027459F179LANT3_HUMANDisease (AT3D)  ---I/LF147L
32UniProtVAR_007055Y190CANT3_HUMANPolymorphism  ---I/LY158C
33UniProtVAR_007056Y198CANT3_HUMANDisease (AT3D)  ---I/LY166C
34UniProtVAR_027460Y198HANT3_HUMANDisease (AT3D)  ---I/LY166H
35UniProtVAR_027461S214FANT3_HUMANDisease (AT3D)  ---I/LS182F
36UniProtVAR_007057S214YANT3_HUMANDisease (AT3D)483352854I/LS182Y
37UniProtVAR_071202I218NANT3_HUMANDisease (AT3D)  ---I/LI186N
38UniProtVAR_007059N219DANT3_HUMANDisease (AT3D)121909571I/LN187D
39UniProtVAR_007058N219KANT3_HUMANDisease (AT3D)  ---I/LN187K
40UniProtVAR_027463S223PANT3_HUMANDisease (AT3D)121909572I/LS191P
41UniProtVAR_027464T243IANT3_HUMANDisease (AT3D)  ---I/LT211I
42UniProtVAR_071203V248GANT3_HUMANDisease (AT3D)  ---I/LV216G
43UniProtVAR_027465I251TANT3_HUMANDisease (AT3D)  ---I/LI219T
44UniProtVAR_027466W257RANT3_HUMANDisease (AT3D)  ---I/LW225R
45UniProtVAR_027467F261LANT3_HUMANDisease (AT3D)  ---I/LF229L
46UniProtVAR_007060E269KANT3_HUMANDisease (AT3D)758087836I/LE237K
47UniProtVAR_007062M283IANT3_HUMANDisease (AT3D)  ---I/LM251I
48UniProtVAR_027468M283VANT3_HUMANDisease (AT3D)  ---I/LM251V
49UniProtVAR_071204R293PANT3_HUMANDisease (AT3D)  ---I/LR261P
50UniProtVAR_007063L302PANT3_HUMANDisease (AT3D)  ---I/LL270P
51UniProtVAR_007064I316NANT3_HUMANDisease (AT3D)  ---I/LI284N
52UniProtVAR_027469S323PANT3_HUMANDisease (AT3D)  ---I/LS291P
53UniProtVAR_007065E334KANT3_HUMANDisease (AT3D)  ---I/LE302K
54UniProtVAR_007067S381PANT3_HUMANDisease (AT3D)121909565I/LS349P
55UniProtVAR_007068R391QANT3_HUMANPolymorphism201541724I/LR359Q
56UniProtVAR_027470S397PANT3_HUMANDisease (AT3D)  ---I/LS365P
57UniProtVAR_027471D398HANT3_HUMANDisease (AT3D)  ---I/LD366H
58UniProtVAR_071205H401RANT3_HUMANDisease (AT3D)  ---I/LH369R
59UniProtVAR_027472S412RANT3_HUMANDisease (AT3D)  ---I/LA380R
60UniProtVAR_007069A414TANT3_HUMANDisease (AT3D)121909557I/LA382T
61UniProtVAR_007070A416PANT3_HUMANDisease (AT3D)28930978I/LA384P
62UniProtVAR_007071A416SANT3_HUMANDisease (AT3D)121909548I/LA384S
63UniProtVAR_007072A419VANT3_HUMANDisease (AT3D)121909568I/LA387V
64UniProtVAR_007073G424DANT3_HUMANDisease (AT3D)121909566I/LG392D
65UniProtVAR_007075R425CANT3_HUMANDisease (AT3D)121909554I/LR393C
66UniProtVAR_007074R425HANT3_HUMANDisease (AT3D)121909549I/LR393H
67UniProtVAR_007076R425PANT3_HUMANDisease (AT3D)121909549I/LR393P
68UniProtVAR_007077S426LANT3_HUMANDisease (AT3D)121909550I/LS394L
69UniProtVAR_007078F434CANT3_HUMANDisease (AT3D)  ---IF402C
70UniProtVAR_007080F434LANT3_HUMANDisease (AT3D)  ---IF402L
71UniProtVAR_007079F434SANT3_HUMANDisease (AT3D)  ---IF402S
72UniProtVAR_007081A436TANT3_HUMANDisease (AT3D)121909546I/LA404T
73UniProtVAR_007082N437KANT3_HUMANDisease (AT3D)  ---I/LN405K
74UniProtVAR_009258R438GANT3_HUMANDisease (AT3D)  ---I/LR406G
75UniProtVAR_007083R438MANT3_HUMANDisease (AT3D)  ---I/LR406M
76UniProtVAR_071206P439AANT3_HUMANDisease (AT3D)  ---I/LP407A
77UniProtVAR_007084P439LANT3_HUMANDisease (AT3D)121909555I/LP407L
78UniProtVAR_007085P439TANT3_HUMANDisease (AT3D)  ---I/LP407T
79UniProtVAR_027473L441PANT3_HUMANDisease (AT3D)  ---I/LL409P
80UniProtVAR_007086I453TANT3_HUMANDisease (AT3D)  ---I/LI421T
81UniProtVAR_007087G456RANT3_HUMANDisease (AT3D)  ---I/LG424R
82UniProtVAR_007088R457TANT3_HUMANDisease (AT3D)  ---I/LR425T
83UniProtVAR_007090A459DANT3_HUMANDisease (AT3D)  ---I/LA427D
84UniProtVAR_007091P461LANT3_HUMANDisease (AT3D)121909564I/LP429L
85UniProtVAR_007092C462FANT3_HUMANDisease (AT3D)  ---I/LC430F

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (85, 85)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_007033I39NANT3_HUMANDisease (AT3D)28929468II7N
02UniProtVAR_007034M52TANT3_HUMANUnclassified  ---IM20T
03UniProtVAR_071199C53FANT3_HUMANDisease (AT3D)  ---IC21F
04UniProtVAR_007035R56CANT3_HUMANDisease (AT3D)28929469IR24C
05UniProtVAR_007037R79CANT3_HUMANDisease (AT3D)121909547IR47C
06UniProtVAR_007038R79HANT3_HUMANDisease (AT3D)121909552IR47H
07UniProtVAR_007039R79SANT3_HUMANDisease (AT3D)121909547IR47S
08UniProtVAR_007041R89CANT3_HUMANDisease (AT3D)147266200IR57C
09UniProtVAR_007042F90LANT3_HUMANDisease (AT3D)  ---IF58L
10UniProtVAR_027452Y95CANT3_HUMANDisease (AT3D)  ---IY63C
11UniProtVAR_012316Y95SANT3_HUMANDisease (AT3D)  ---IY63S
12UniProtVAR_027453L98PANT3_HUMANDisease (AT3D)  ---IL66P
13UniProtVAR_007044P112TANT3_HUMANDisease (AT3D)  ---IP80T
14UniProtVAR_027454M121KANT3_HUMANDisease (AT3D)  ---IM89K
15UniProtVAR_071200G125DANT3_HUMANDisease (AT3D)  ---IG93D
16UniProtVAR_027455C127RANT3_HUMANDisease (AT3D)121909573IC95R
17UniProtVAR_007045L131FANT3_HUMANDisease (AT3D)121909567IL99F
18UniProtVAR_007046L131VANT3_HUMANDisease (AT3D)  ---IL99V
19UniProtVAR_007047Q133KANT3_HUMANDisease (AT3D)  ---IQ101K
20UniProtVAR_027456K146EANT3_HUMANDisease (AT3D)  ---IK114E
21UniProtVAR_013085T147AANT3_HUMANPolymorphism2227606IT115A
22UniProtVAR_007049S148PANT3_HUMANDisease (AT3D)121909569IS116P
23UniProtVAR_007050Q150PANT3_HUMANDisease (AT3D)765445413IQ118P
24UniProtVAR_007051H152YANT3_HUMANDisease (AT3D)  ---IH120Y
25UniProtVAR_007053L158PANT3_HUMANDisease (AT3D)  ---IL126P
26UniProtVAR_027457C160YANT3_HUMANDisease (AT3D)  ---IC128Y
27UniProtVAR_007054R161QANT3_HUMANDisease (AT3D)121909563IR129Q
28UniProtVAR_012750N167TANT3_HUMANPolymorphism121909570IA135T
29UniProtVAR_071201S170PANT3_HUMANDisease (AT3D)  ---IS138P
30UniProtVAR_027458L178HANT3_HUMANDisease (AT3D)  ---IL146H
31UniProtVAR_027459F179LANT3_HUMANDisease (AT3D)  ---IF147L
32UniProtVAR_007055Y190CANT3_HUMANPolymorphism  ---IY158C
33UniProtVAR_007056Y198CANT3_HUMANDisease (AT3D)  ---IY166C
34UniProtVAR_027460Y198HANT3_HUMANDisease (AT3D)  ---IY166H
35UniProtVAR_027461S214FANT3_HUMANDisease (AT3D)  ---IS182F
36UniProtVAR_007057S214YANT3_HUMANDisease (AT3D)483352854IS182Y
37UniProtVAR_071202I218NANT3_HUMANDisease (AT3D)  ---II186N
38UniProtVAR_007059N219DANT3_HUMANDisease (AT3D)121909571IN187D
39UniProtVAR_007058N219KANT3_HUMANDisease (AT3D)  ---IN187K
40UniProtVAR_027463S223PANT3_HUMANDisease (AT3D)121909572IS191P
41UniProtVAR_027464T243IANT3_HUMANDisease (AT3D)  ---IT211I
42UniProtVAR_071203V248GANT3_HUMANDisease (AT3D)  ---IV216G
43UniProtVAR_027465I251TANT3_HUMANDisease (AT3D)  ---II219T
44UniProtVAR_027466W257RANT3_HUMANDisease (AT3D)  ---IW225R
45UniProtVAR_027467F261LANT3_HUMANDisease (AT3D)  ---IF229L
46UniProtVAR_007060E269KANT3_HUMANDisease (AT3D)758087836IE237K
47UniProtVAR_007062M283IANT3_HUMANDisease (AT3D)  ---IM251I
48UniProtVAR_027468M283VANT3_HUMANDisease (AT3D)  ---IM251V
49UniProtVAR_071204R293PANT3_HUMANDisease (AT3D)  ---IR261P
50UniProtVAR_007063L302PANT3_HUMANDisease (AT3D)  ---IL270P
51UniProtVAR_007064I316NANT3_HUMANDisease (AT3D)  ---II284N
52UniProtVAR_027469S323PANT3_HUMANDisease (AT3D)  ---IS291P
53UniProtVAR_007065E334KANT3_HUMANDisease (AT3D)  ---IE302K
54UniProtVAR_007067S381PANT3_HUMANDisease (AT3D)121909565IS349P
55UniProtVAR_007068R391QANT3_HUMANPolymorphism201541724IR359Q
56UniProtVAR_027470S397PANT3_HUMANDisease (AT3D)  ---IS365P
57UniProtVAR_027471D398HANT3_HUMANDisease (AT3D)  ---ID366H
58UniProtVAR_071205H401RANT3_HUMANDisease (AT3D)  ---IH369R
59UniProtVAR_027472S412RANT3_HUMANDisease (AT3D)  ---IA380R
60UniProtVAR_007069A414TANT3_HUMANDisease (AT3D)121909557IA382T
61UniProtVAR_007070A416PANT3_HUMANDisease (AT3D)28930978IA384P
62UniProtVAR_007071A416SANT3_HUMANDisease (AT3D)121909548IA384S
63UniProtVAR_007072A419VANT3_HUMANDisease (AT3D)121909568IA387V
64UniProtVAR_007073G424DANT3_HUMANDisease (AT3D)121909566IG392D
65UniProtVAR_007075R425CANT3_HUMANDisease (AT3D)121909554IR393C
66UniProtVAR_007074R425HANT3_HUMANDisease (AT3D)121909549IR393H
67UniProtVAR_007076R425PANT3_HUMANDisease (AT3D)121909549IR393P
68UniProtVAR_007077S426LANT3_HUMANDisease (AT3D)121909550IS394L
69UniProtVAR_007078F434CANT3_HUMANDisease (AT3D)  ---IF402C
70UniProtVAR_007080F434LANT3_HUMANDisease (AT3D)  ---IF402L
71UniProtVAR_007079F434SANT3_HUMANDisease (AT3D)  ---IF402S
72UniProtVAR_007081A436TANT3_HUMANDisease (AT3D)121909546IA404T
73UniProtVAR_007082N437KANT3_HUMANDisease (AT3D)  ---IN405K
74UniProtVAR_009258R438GANT3_HUMANDisease (AT3D)  ---IR406G
75UniProtVAR_007083R438MANT3_HUMANDisease (AT3D)  ---IR406M
76UniProtVAR_071206P439AANT3_HUMANDisease (AT3D)  ---IP407A
77UniProtVAR_007084P439LANT3_HUMANDisease (AT3D)121909555IP407L
78UniProtVAR_007085P439TANT3_HUMANDisease (AT3D)  ---IP407T
79UniProtVAR_027473L441PANT3_HUMANDisease (AT3D)  ---IL409P
80UniProtVAR_007086I453TANT3_HUMANDisease (AT3D)  ---II421T
81UniProtVAR_007087G456RANT3_HUMANDisease (AT3D)  ---IG424R
82UniProtVAR_007088R457TANT3_HUMANDisease (AT3D)  ---IR425T
83UniProtVAR_007090A459DANT3_HUMANDisease (AT3D)  ---IA427D
84UniProtVAR_007091P461LANT3_HUMANDisease (AT3D)121909564IP429L
85UniProtVAR_007092C462FANT3_HUMANDisease (AT3D)  ---IC430F

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (82, 82)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_007033I39NANT3_HUMANDisease (AT3D)28929468LI7N
02UniProtVAR_007034M52TANT3_HUMANUnclassified  ---LM20T
03UniProtVAR_071199C53FANT3_HUMANDisease (AT3D)  ---LC21F
04UniProtVAR_007035R56CANT3_HUMANDisease (AT3D)28929469LR24C
05UniProtVAR_007037R79CANT3_HUMANDisease (AT3D)121909547LR47C
06UniProtVAR_007038R79HANT3_HUMANDisease (AT3D)121909552LR47H
07UniProtVAR_007039R79SANT3_HUMANDisease (AT3D)121909547LR47S
08UniProtVAR_007041R89CANT3_HUMANDisease (AT3D)147266200LR57C
09UniProtVAR_007042F90LANT3_HUMANDisease (AT3D)  ---LF58L
10UniProtVAR_027452Y95CANT3_HUMANDisease (AT3D)  ---LY63C
11UniProtVAR_012316Y95SANT3_HUMANDisease (AT3D)  ---LY63S
12UniProtVAR_027453L98PANT3_HUMANDisease (AT3D)  ---LL66P
13UniProtVAR_007044P112TANT3_HUMANDisease (AT3D)  ---LP80T
14UniProtVAR_027454M121KANT3_HUMANDisease (AT3D)  ---LM89K
15UniProtVAR_071200G125DANT3_HUMANDisease (AT3D)  ---LG93D
16UniProtVAR_027455C127RANT3_HUMANDisease (AT3D)121909573LC95R
17UniProtVAR_007045L131FANT3_HUMANDisease (AT3D)121909567LL99F
18UniProtVAR_007046L131VANT3_HUMANDisease (AT3D)  ---LL99V
19UniProtVAR_007047Q133KANT3_HUMANDisease (AT3D)  ---LQ101K
20UniProtVAR_027456K146EANT3_HUMANDisease (AT3D)  ---LK114E
21UniProtVAR_013085T147AANT3_HUMANPolymorphism2227606LT115A
22UniProtVAR_007049S148PANT3_HUMANDisease (AT3D)121909569LS116P
23UniProtVAR_007050Q150PANT3_HUMANDisease (AT3D)765445413LQ118P
24UniProtVAR_007051H152YANT3_HUMANDisease (AT3D)  ---LH120Y
25UniProtVAR_007053L158PANT3_HUMANDisease (AT3D)  ---LL126P
26UniProtVAR_027457C160YANT3_HUMANDisease (AT3D)  ---LC128Y
27UniProtVAR_007054R161QANT3_HUMANDisease (AT3D)121909563LR129Q
28UniProtVAR_012750N167TANT3_HUMANPolymorphism121909570LA135T
29UniProtVAR_071201S170PANT3_HUMANDisease (AT3D)  ---LS138P
30UniProtVAR_027458L178HANT3_HUMANDisease (AT3D)  ---LL146H
31UniProtVAR_027459F179LANT3_HUMANDisease (AT3D)  ---LF147L
32UniProtVAR_007055Y190CANT3_HUMANPolymorphism  ---LY158C
33UniProtVAR_007056Y198CANT3_HUMANDisease (AT3D)  ---LY166C
34UniProtVAR_027460Y198HANT3_HUMANDisease (AT3D)  ---LY166H
35UniProtVAR_027461S214FANT3_HUMANDisease (AT3D)  ---LS182F
36UniProtVAR_007057S214YANT3_HUMANDisease (AT3D)483352854LS182Y
37UniProtVAR_071202I218NANT3_HUMANDisease (AT3D)  ---LI186N
38UniProtVAR_007059N219DANT3_HUMANDisease (AT3D)121909571LN187D
39UniProtVAR_007058N219KANT3_HUMANDisease (AT3D)  ---LN187K
40UniProtVAR_027463S223PANT3_HUMANDisease (AT3D)121909572LS191P
41UniProtVAR_027464T243IANT3_HUMANDisease (AT3D)  ---LT211I
42UniProtVAR_071203V248GANT3_HUMANDisease (AT3D)  ---LV216G
43UniProtVAR_027465I251TANT3_HUMANDisease (AT3D)  ---LI219T
44UniProtVAR_027466W257RANT3_HUMANDisease (AT3D)  ---LW225R
45UniProtVAR_027467F261LANT3_HUMANDisease (AT3D)  ---LF229L
46UniProtVAR_007060E269KANT3_HUMANDisease (AT3D)758087836LE237K
47UniProtVAR_007062M283IANT3_HUMANDisease (AT3D)  ---LM251I
48UniProtVAR_027468M283VANT3_HUMANDisease (AT3D)  ---LM251V
49UniProtVAR_071204R293PANT3_HUMANDisease (AT3D)  ---LR261P
50UniProtVAR_007063L302PANT3_HUMANDisease (AT3D)  ---LL270P
51UniProtVAR_007064I316NANT3_HUMANDisease (AT3D)  ---LI284N
52UniProtVAR_027469S323PANT3_HUMANDisease (AT3D)  ---LS291P
53UniProtVAR_007065E334KANT3_HUMANDisease (AT3D)  ---LE302K
54UniProtVAR_007067S381PANT3_HUMANDisease (AT3D)121909565LS349P
55UniProtVAR_007068R391QANT3_HUMANPolymorphism201541724LR359Q
56UniProtVAR_027470S397PANT3_HUMANDisease (AT3D)  ---LS365P
57UniProtVAR_027471D398HANT3_HUMANDisease (AT3D)  ---LD366H
58UniProtVAR_071205H401RANT3_HUMANDisease (AT3D)  ---LH369R
59UniProtVAR_027472S412RANT3_HUMANDisease (AT3D)  ---LA380R
60UniProtVAR_007069A414TANT3_HUMANDisease (AT3D)121909557LA382T
61UniProtVAR_007070A416PANT3_HUMANDisease (AT3D)28930978LA384P
62UniProtVAR_007071A416SANT3_HUMANDisease (AT3D)121909548LA384S
63UniProtVAR_007072A419VANT3_HUMANDisease (AT3D)121909568LA387V
64UniProtVAR_007073G424DANT3_HUMANDisease (AT3D)121909566LG392D
65UniProtVAR_007075R425CANT3_HUMANDisease (AT3D)121909554LR393C
66UniProtVAR_007074R425HANT3_HUMANDisease (AT3D)121909549LR393H
67UniProtVAR_007076R425PANT3_HUMANDisease (AT3D)121909549LR393P
68UniProtVAR_007077S426LANT3_HUMANDisease (AT3D)121909550LS394L
72UniProtVAR_007081A436TANT3_HUMANDisease (AT3D)121909546LA404T
73UniProtVAR_007082N437KANT3_HUMANDisease (AT3D)  ---LN405K
74UniProtVAR_009258R438GANT3_HUMANDisease (AT3D)  ---LR406G
75UniProtVAR_007083R438MANT3_HUMANDisease (AT3D)  ---LR406M
76UniProtVAR_071206P439AANT3_HUMANDisease (AT3D)  ---LP407A
77UniProtVAR_007084P439LANT3_HUMANDisease (AT3D)121909555LP407L
78UniProtVAR_007085P439TANT3_HUMANDisease (AT3D)  ---LP407T
79UniProtVAR_027473L441PANT3_HUMANDisease (AT3D)  ---LL409P
80UniProtVAR_007086I453TANT3_HUMANDisease (AT3D)  ---LI421T
81UniProtVAR_007087G456RANT3_HUMANDisease (AT3D)  ---LG424R
82UniProtVAR_007088R457TANT3_HUMANDisease (AT3D)  ---LR425T
83UniProtVAR_007090A459DANT3_HUMANDisease (AT3D)  ---LA427D
84UniProtVAR_007091P461LANT3_HUMANDisease (AT3D)121909564LP429L
85UniProtVAR_007092C462FANT3_HUMANDisease (AT3D)  ---LC430F

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 2)

Asymmetric Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SERPINPS00284 Serpins signature.ANT3_HUMAN434-444
 
  2I:402-412
L:403-412
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SERPINPS00284 Serpins signature.ANT3_HUMAN434-444
 
  1I:402-412
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SERPINPS00284 Serpins signature.ANT3_HUMAN434-444
 
  1-
L:403-412

(-) Exons   (6, 12)

Asymmetric Unit (6, 12)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000003676981aENSE00001944151chr1:173886516-173886357160ANT3_HUMAN1-14140--
1.3aENST000003676983aENSE00000814673chr1:173884057-173883691367ANT3_HUMAN14-1361232I:5-104 (gaps)
L:5-104 (gaps)
100
100
1.4cENST000003676984cENSE00000789910chr1:173881152-173880937216ANT3_HUMAN137-208722I:105-176
L:105-176
72
72
1.5aENST000003676985aENSE00000789909chr1:173880029-173879892138ANT3_HUMAN209-254462I:177-222 (gaps)
L:177-222
46
46
1.6bENST000003676986bENSE00000789908chr1:173879080-173878690391ANT3_HUMAN255-3851312I:223-353
L:223-353
131
131
1.7aENST000003676987aENSE00001383315chr1:173876652-17387658865ANT3_HUMAN385-406222I:353-374
L:353-374
22
22
1.8aENST000003676988aENSE00001876994chr1:173873203-173872947257ANT3_HUMAN407-464582I:375-431
L:375-430 (gaps)
57
56

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain I from PDB  Type:PROTEIN  Length:411
 aligned with ANT3_HUMAN | P01008 from UniProtKB/Swiss-Prot  Length:464

    Alignment length:427
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       
           ANT3_HUMAN    37 VDICTAKPRDIPMNPMCIYRSPEKKATEDEGSEQKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCV 463
               SCOP domains d2hiji1 I:5-431 Antithro               mbin                                                                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains ----2hijI01 I:9-224,I:32               1-377 Antithrombin, subunit I, domain 2                                                                                                                                              2hijI02 I:225-320,I:383-430 Alpha-1-antitrypsin, domain 1                                       2hijI01 I:9-224,I:321-377                                -----2hijI02 I:225-320,I:383-430                     - CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhh..hhhhh......---------------.....hhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.......eeee..eeeee..eeehhhhhhhhhhhhh....ee.....hhhhhhhhhhhhhhhh..........-.......eeeee.eeeeee.....hhhhheeeeee.....eeeeeeeeeeeeeeeeeehhheeeeeee.....eeeeeee.....hhhhhhh..hhhhhhhhhhhheeeeeeeeee.eeeeeeeehhhhhhh...hhhhh........eee.........eeeeeeeeee...ee......eeee..........eee....eeeeeee.hhheeeeeeee..... Sec.struct. author
             SAPs(SNPs) (1) --N------------TF--C----------------------C---------CL----C--P-------------T--------K---D-R---F-K------------EAP-P-Y-----P-YQ-----T--P-------HL----------C-------C---------------F---ND---P-------------------I----G--T-----R---L-------K-------------I---------P--------P-------------N------P----------K----------------------------------------------P---------Q-----PH--R----------R-T-P--V----DCL-------C-TKGA-P-----------T--RT-D-LF- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------H---------------S-----------------------------------V------------------------------------------------------------------H---------------Y----K---------------------------------------------------------------V------------------------------------------------------------------------------------------------------------------------------------S--------H--------L---ML------------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------------------------------S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--------S----T------------------------ SAPs(SNPs) (3)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERPIN     ------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: I:5-104 (gaps) UniProt: 14-136 [INCOMPLETE]                                         Exon 1.4c  PDB: I:105-176 UniProt: 137-208                              Exon 1.5a  PDB: I:177-222 (gaps)              Exon 1.6b  PDB: I:223-353 UniProt: 255-385                                                                                         ---------------------Exon 1.8a  PDB: I:375-431 UniProt: 407-464 [INCOMPLETE]   Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7a             --------------------------------------------------------- Transcript 1 (2)
                 2hij I   5 VDICTAKPRDIPMNPMCIYRSPEK---------------TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKAAKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPS-AINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGAEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCV 431
                                    14        24   |     -        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204 |     214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       
                                                  28              44                                                                                                                                                             204 |                                                                                                                                                                                                                                 
                                                                                                                                                                                                                                   206                                                                                                                                                                                                                                 

Chain L from PDB  Type:PROTEIN  Length:409
 aligned with ANT3_HUMAN | P01008 from UniProtKB/Swiss-Prot  Length:464

    Alignment length:426
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456      
           ANT3_HUMAN    37 VDICTAKPRDIPMNPMCIYRSPEKKATEDEGSEQKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPC 462
               SCOP domains d2hijl_ L: Antithrombi                n                                                                                                                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains -------2hijL01 L:12-22                4,L:321-377 Antithrombin, subunit I, domain 2                                                                                                                                         2hijL02 L:225-320,L:383-430 Alpha-1-antitrypsin, domain 1                                       2hijL01 L:12-224,L:321-377                               -----2hijL02 L:225-320,L :383-430                     CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......................----------------hhhhhhhhhhhhhhhhhhhhhhhhhh.......eeehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh......eeeeeeeeeee...eehhhhhhhhhhhh..eeeeehhhhhhhhhhhhhhhhhhhh...................eeeeeeeeeeee.....hhhhheeeeee.....eeeeeeeeeeeeeeeee.....eeeeee.....eeeeeee.....hhhhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeehhhhhhhh..hhhhh.........eee......eeeeeeeeeeee...eeeeeeeeeeee...........-.....eeeeeee....eeeeeeee.... Sec.struct. author
             SAPs(SNPs) (1) --N------------TF--C----------------------C---------CL----C--P-------------T--------K---D-R---F-K------------EAP-P-Y-----P-YQ--------P-------HL----------C-------C---------------F---ND---P-------------------I----G--T-----R---L-------K-------------I---------P--------P-------------N------P----------K----------------------------------------------P---------Q-----PH--R------------T-P--V----DCL---------TKGA-P-----------T--RT-D-LF SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------H---------------S-----------------------------------V------------------------------------------------------------------H---------------Y----K---------------------------------------------------------------V------------------------------------------------------------------------------------------------------------------------------------S--------H------------ML----------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) ------------------------------------------S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P-------------T----------------------- SAPs(SNPs) (3)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERPIN     ------------------ PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: L:5-104 (gaps) UniProt: 14-136 [INCOMPLETE]                                         Exon 1.4c  PDB: L:105-176 UniProt: 137-208                              Exon 1.5a  PDB: L:177-222 UniProt: 209-254    Exon 1.6b  PDB: L:223-353 UniProt: 255-385                                                                                         ---------------------Exon 1.8a  PDB: L:375-430 (gaps) UniProt: 407-464        Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7a             -------------------------------------------------------- Transcript 1 (2)
                 2hij L   5 VDICTAKPRDIPMNPMCIYRSP----------------ATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVT-KANRPFLVFIREVPLNTIIFMGRVANPC 430
                                    14        24 |       -        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394      |404       414       424      
                                                26               43                                                                                                                                                                                                                                                                                                                                                                   401 |                           
                                                                                                                                                                                                                                                                                                                                                                                                                                        403                           

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (2, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2HIJ)

(-) Gene Ontology  (17, 17)

Asymmetric Unit(hide GO term definitions)
Chain I,L   (ANT3_HUMAN | P01008)
molecular function
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0030414    peptidase inhibitor activity    Stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.
    GO:0002020    protease binding    Interacting selectively and non-covalently with any protease or peptidase.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004867    serine-type endopeptidase inhibitor activity    Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
biological process
    GO:0007596    blood coagulation    The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
    GO:0007599    hemostasis    The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.
    GO:0010951    negative regulation of endopeptidase activity    Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
    GO:0050728    negative regulation of inflammatory response    Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.
    GO:0010466    negative regulation of peptidase activity    Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.
    GO:2000266    regulation of blood coagulation, intrinsic pathway    Any process that modulates the frequency, rate or extent of blood coagulation, intrinsic pathway.
    GO:0007584    response to nutrient    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.
cellular component
    GO:0072562    blood microparticle    A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ANT3_HUMAN | P010081ant 1ath 1azx 1br8 1dzg 1dzh 1e03 1e04 1e05 1jvq 1lk6 1nq9 1oyh 1r1l 1sr5 1t1f 1tb6 2ant 2b4x 2b5t 2beh 2gd4 2znh 3evj 3kcg 4eb1

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2HIJ)