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(-) Description

Title :  SOLUTION STRUCTURE OF THE CUE DOMAIN IN THE HUMAN CUE DOMAIN CONTAINING PROTEIN 1 (CUEDC1)
 
Authors :  C. Zhao, T. Kigawa, M. Sato, S. Koshiba, M. Inoue, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date :  27 Mar 06  (Deposition) - 27 Sep 06  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Cue Domain Containing Protein 1 (Cuedc1), Cue Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. Zhao, T. Kigawa, M. Sato, S. Koshiba, M. Inoue, S. Yokoyama
Solution Structure Of The Cue Domain In The Human Cue Domain Containing Protein 1 (Cuedc1)
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CUE DOMAIN-CONTAINING PROTEIN 1
    ChainsA
    EngineeredYES
    Expression SystemCELL FREE SYNTHESIS
    Expression System PlasmidP050905-16
    Expression System Vector TypePLASMID
    FragmentCUE DOMAIN
    GeneCUEDC1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsCELL-FREE PROTEIN SYNTHESIS

 Structural Features

(-) Chains, Units

  
NMR Structure (20x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CUEPS51140 CUE domain profile.CUED1_HUMAN46-89  1A:17-60

(-) Exons   (1, 1)

NMR Structure (1, 1)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.2ENST000003602382ENSE00001514265chr17:55980750-55980347404CUED1_HUMAN-00--
1.3ENST000003602383ENSE00001219884chr17:55963240-55962590651CUED1_HUMAN1-1121121A:1-67 (gaps)89
1.4ENST000003602384ENSE00001219865chr17:55957099-55956972128CUED1_HUMAN113-155430--
1.5ENST000003602385ENSE00001219859chr17:55951078-55950952127CUED1_HUMAN155-197430--
1.6bENST000003602386bENSE00001219854chr17:55950216-55950024193CUED1_HUMAN198-262650--
1.7bENST000003602387bENSE00001219849chr17:55948730-5594864784CUED1_HUMAN262-290290--
1.8ENST000003602388ENSE00001219845chr17:55946554-5594648372CUED1_HUMAN290-314250--
1.9ENST000003602389ENSE00001219838chr17:55945604-5594551194CUED1_HUMAN314-345320--
1.10ENST0000036023810ENSE00001219833chr17:55944776-5594471859CUED1_HUMAN345-365210--
1.11ENST0000036023811ENSE00001219881chr17:55943905-5594383571CUED1_HUMAN365-386220--
1.12ENST0000036023812ENSE00001347008chr17:55940646-55940337310CUED1_HUMAN-00--

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:67
 aligned with CUED1_HUMAN | Q9NWM3 from UniProtKB/Swiss-Prot  Length:386

    Alignment length:89
                                    17        27        37        47        57        67        77        87         
           CUED1_HUMAN    8 SSSGSGGGGTAGARGGGGGTAAPQELNNSRPARQVRRLEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLEGGGSSG 96
               SCOP domains ----------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......----------------------..........hhhhhhhhhhhh...hhhhhhhhhhhhh.hhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------CUE  PDB: A:17-60 UniProt: 46-89            ------- PROSITE
               Transcript 1 Exon 1.3  PDB: A:1-67 (gaps) UniProt: 1-112 [INCOMPLETE]                                  Transcript 1
                  2dhy A  1 GSSGSSG----------------------RPARQVRRLEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLESGPSSG 67
                                  |  -         -         8        18        28        38        48        58         
                                  7                      8                                                           

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 Classification and Annotation

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NMR Structure(hide GO term definitions)
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