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(-) Description

Title :  HUMAN DEATH-ASSOCIATED DRP-1 KINASE IN COMPLEX WITH INHIBITOR
 
Authors :  P. Kursula, M. Wilmanns
Date :  18 Apr 06  (Deposition) - 15 May 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Transferase-Inhibitor Complex, Transferase/Inhibitor Complex, Calmodulin-Binding, Nucleotide-Binding, Serine/Threonine-Protein Kinase, Apoptosis (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  P. Kursula, M. Wilmanns
Crystal Structure Of Human Drp-1 Complexed With An Inhibito
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - DEATH-ASSOCIATED PROTEIN KINASE 2
    ChainsA, B, C, D
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPDEST-15
    Expression System StrainROSETTA(DE3)
    Expression System Taxid511693
    Expression System VariantPLYSS
    Expression System Vector TypePLASMID
    FragmentRESIDUES 11-330
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymHUMAN DRP-1 KINASE, DAP KINASE 2, DAP-KINASE- RELATED PROTEIN 1, DRP-1

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)A   
Biological Unit 2 (1x) B  
Biological Unit 3 (1x)  C 
Biological Unit 4 (1x)   D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1IQU4Ligand/IonN-(2-AMINOETHYL)ISOQUINOLINE-5-SULFONAMIDE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1IQU1Ligand/IonN-(2-AMINOETHYL)ISOQUINOLINE-5-SULFONAMIDE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1IQU1Ligand/IonN-(2-AMINOETHYL)ISOQUINOLINE-5-SULFONAMIDE
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1IQU1Ligand/IonN-(2-AMINOETHYL)ISOQUINOLINE-5-SULFONAMIDE
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1IQU1Ligand/IonN-(2-AMINOETHYL)ISOQUINOLINE-5-SULFONAMIDE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:19 , GLY A:20 , SER A:21 , VAL A:27 , ALA A:40 , ILE A:77 , GLU A:94 , VAL A:96 , MET A:146 , ILE A:160BINDING SITE FOR RESIDUE IQU A1302
2AC2SOFTWARELEU B:19 , GLY B:20 , VAL B:27 , ALA B:40 , ILE B:77 , GLU B:94 , VAL B:96 , MET B:146BINDING SITE FOR RESIDUE IQU B1302
3AC3SOFTWARELEU C:19 , GLY C:20 , VAL C:27 , ALA C:40 , ILE C:77 , GLU C:94 , LEU C:95 , VAL C:96BINDING SITE FOR RESIDUE IQU C1302
4AC4SOFTWARELEU D:19 , GLY D:20 , SER D:21 , VAL D:27 , ALA D:40 , ILE D:77 , GLU D:94 , LEU D:95 , VAL D:96 , ILE D:160BINDING SITE FOR RESIDUE IQU D1302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2CKE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2CKE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 8)

Asymmetric Unit (2, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_040436R60WDAPK2_HUMANPolymorphism56047843A/B/C/DR50W
2UniProtVAR_040437R271WDAPK2_HUMANPolymorphism34270163A/B/C/DR261W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_040436R60WDAPK2_HUMANPolymorphism56047843AR50W
2UniProtVAR_040437R271WDAPK2_HUMANPolymorphism34270163AR261W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_040436R60WDAPK2_HUMANPolymorphism56047843BR50W
2UniProtVAR_040437R271WDAPK2_HUMANPolymorphism34270163BR261W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_040436R60WDAPK2_HUMANPolymorphism56047843CR50W
2UniProtVAR_040437R271WDAPK2_HUMANPolymorphism34270163CR261W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (2, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_040436R60WDAPK2_HUMANPolymorphism56047843DR50W
2UniProtVAR_040437R271WDAPK2_HUMANPolymorphism34270163DR261W

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.DAPK2_HUMAN29-56
 
 
 
  4A:19-46
B:19-46
C:19-46
D:19-46
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.DAPK2_HUMAN145-157
 
 
 
  4A:135-147
B:135-147
C:135-147
D:135-147
Biological Unit 1 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.DAPK2_HUMAN29-56
 
 
 
  1A:19-46
-
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.DAPK2_HUMAN145-157
 
 
 
  1A:135-147
-
-
-
Biological Unit 2 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.DAPK2_HUMAN29-56
 
 
 
  1-
B:19-46
-
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.DAPK2_HUMAN145-157
 
 
 
  1-
B:135-147
-
-
Biological Unit 3 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.DAPK2_HUMAN29-56
 
 
 
  1-
-
C:19-46
-
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.DAPK2_HUMAN145-157
 
 
 
  1-
-
C:135-147
-
Biological Unit 4 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PROTEIN_KINASE_ATPPS00107 Protein kinases ATP-binding region signature.DAPK2_HUMAN29-56
 
 
 
  1-
-
-
D:19-46
2PROTEIN_KINASE_STPS00108 Serine/Threonine protein kinases active-site signature.DAPK2_HUMAN145-157
 
 
 
  1-
-
-
D:135-147

(-) Exons   (9, 36)

Asymmetric Unit (9, 36)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.2ENST000002618912ENSE00002147850chr15:64332466-6433236998DAPK2_HUMAN1-31314A:1-21
B:2-21
C:2-21
D:2-21
21
20
20
20
1.3ENST000002618913ENSE00001770226chr15:64275953-64275732222DAPK2_HUMAN31-105754A:21-95
B:21-95
C:21-95
D:21-95
75
75
75
75
1.4ENST000002618914ENSE00001749190chr15:64263760-64263622139DAPK2_HUMAN105-151474A:95-141
B:95-141
C:95-141
D:95-141
47
47
47
47
1.5ENST000002618915ENSE00001698100chr15:64231560-64231431130DAPK2_HUMAN152-195444A:142-185
B:142-185
C:142-185
D:142-185
44
44
44
44
1.6ENST000002618916ENSE00001201925chr15:64222654-6422260649DAPK2_HUMAN195-211174A:185-201
B:185-201
C:185-201
D:185-201
17
17
17
17
1.7ENST000002618917ENSE00001281575chr15:64221776-6422175027DAPK2_HUMAN211-220104A:201-210
B:201-210
C:201-210
D:201-210
10
10
10
10
1.8ENST000002618918ENSE00001281565chr15:64218292-64218140153DAPK2_HUMAN220-271524A:210-261
B:210-261
C:210-261
D:210-261
52
52
52
52
1.9ENST000002618919ENSE00001281556chr15:64217060-6421701546DAPK2_HUMAN271-286164A:261-276
B:261-276
C:261-276
D:261-276
16
16
16
16
1.10ENST0000026189110ENSE00001281547chr15:64204396-6420430790DAPK2_HUMAN287-316304A:277-301
B:277-301
C:277-301
D:277-301
25
25
25
25
1.11aENST0000026189111aENSE00001281540chr15:64204190-6420410784DAPK2_HUMAN317-344280--
1.12bENST0000026189112bENSE00001281614chr15:64200799-641992351565DAPK2_HUMAN345-370260--

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:301
 aligned with DAPK2_HUMAN | Q9UIK4 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:301
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310 
          DAPK2_HUMAN    11 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 311
               SCOP domains d2ckea_ A: automated matches                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains 2ckeA01 A:1-97 Phosphorylase Kinase; domain 1                                                    2ckeA02 A:98-301 Transferase(Phosphotransferase) domain 1                                                                                                                                                    CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhh.eeeeeeee....eeeeeeee.....eeeeeeee...........hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.........eee......ee............hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh....hhhhhh..hhhhhhhhhhhh........hhhhhhh.......hhhhhhhhhhh..hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------W------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W---------------------------------------- SAPs(SNPs)
                    PROSITE ------------------PROTEIN_KINASE_ATP          ----------------------------------------------------------------------------------------PROTEIN_KINAS---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: A:1-21-------------------------------------------------------------------------Exon 1.4  PDB: A:95-141 UniProt: 105-151       Exon 1.5  PDB: A:142-185 UniProt: 152-195   ---------------Exon 1.7  --------------------------------------------------Exon 1.9        Exon 1.10  PDB: A:277-301 Transcript 1 (1)
           Transcript 1 (2) --------------------Exon 1.3  PDB: A:21-95 UniProt: 31-105                                     -----------------------------------------------------------------------------------------Exon 1.6         --------Exon 1.8  PDB: A:210-261 UniProt: 220-271           ---------------------------------------- Transcript 1 (2)
                 2cke A   1 MEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 301
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300 

Chain B from PDB  Type:PROTEIN  Length:300
 aligned with DAPK2_HUMAN | Q9UIK4 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:300
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311
          DAPK2_HUMAN    12 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 311
               SCOP domains d2ckeb_ B: automated matches                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 2ckeB01 B:2-97 Phosphorylase Kinase; domain 1                                                   2ckeB02 B:98-301 Transferase(Phosphotransferase) domain 1                                                                                                                                                    CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhheeeeeeee....eeeeeeee.....eeeeeeee...........hhhhhhhhhhhhh.........eeeeee...eeeeee......hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.........eee......ee............hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh.....hhhhhh..hhhhhhhhhh..........hhhhhhhh......hhhhhhhhhhh..hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------W------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W---------------------------------------- SAPs(SNPs)
                    PROSITE -----------------PROTEIN_KINASE_ATP          ----------------------------------------------------------------------------------------PROTEIN_KINAS---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: B:2-2-------------------------------------------------------------------------Exon 1.4  PDB: B:95-141 UniProt: 105-151       Exon 1.5  PDB: B:142-185 UniProt: 152-195   ---------------Exon 1.7  --------------------------------------------------Exon 1.9        Exon 1.10  PDB: B:277-301 Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.3  PDB: B:21-95 UniProt: 31-105                                     -----------------------------------------------------------------------------------------Exon 1.6         --------Exon 1.8  PDB: B:210-261 UniProt: 220-271           ---------------------------------------- Transcript 1 (2)
                 2cke B   2 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 301
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301

Chain C from PDB  Type:PROTEIN  Length:300
 aligned with DAPK2_HUMAN | Q9UIK4 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:300
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311
          DAPK2_HUMAN    12 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 311
               SCOP domains d2ckec_ C: automated matches                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 2ckeC01 C:2-97 Phosphorylase Kinase; domain 1                                                   2ckeC02 C:98-301 Transferase(Phosphotransferase) domain 1                                                                                                                                                    CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhh.eeeeeeeeee..eeeeeeee.....eeeeeeee...........hhhhhhhhhhhhhhh.......eeeeee...eeeeeee.....hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.........eee......ee............hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh....hhhhhh..hhhhhhhhhhhh........hhhhhhh.......hhhhhhhhhhh..hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------W------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W---------------------------------------- SAPs(SNPs)
                    PROSITE -----------------PROTEIN_KINASE_ATP          ----------------------------------------------------------------------------------------PROTEIN_KINAS---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: C:2-2-------------------------------------------------------------------------Exon 1.4  PDB: C:95-141 UniProt: 105-151       Exon 1.5  PDB: C:142-185 UniProt: 152-195   ---------------Exon 1.7  --------------------------------------------------Exon 1.9        Exon 1.10  PDB: C:277-301 Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.3  PDB: C:21-95 UniProt: 31-105                                     -----------------------------------------------------------------------------------------Exon 1.6         --------Exon 1.8  PDB: C:210-261 UniProt: 220-271           ---------------------------------------- Transcript 1 (2)
                 2cke C   2 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 301
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301

Chain D from PDB  Type:PROTEIN  Length:300
 aligned with DAPK2_HUMAN | Q9UIK4 from UniProtKB/Swiss-Prot  Length:370

    Alignment length:300
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311
          DAPK2_HUMAN    12 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 311
               SCOP domains d2cked_ D: automated matches                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 2ckeD01 D:2-97 Phosphorylase Kinase; domain 1                                                   2ckeD02 D:98-301 Transferase(Phosphotransferase) domain 1                                                                                                                                                    CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhheeeeeeeee...eeeeeeee.....eeeeeeee...........hhhhhhhhhhhhhhh.......eeeeee...eeeeeee.....hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.........eee......ee............hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh....hhhhhh..hhhhhhhhhhhh........hhhhhhhh......hhhhhhhhhhh..hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------W------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W---------------------------------------- SAPs(SNPs)
                    PROSITE -----------------PROTEIN_KINASE_ATP          ----------------------------------------------------------------------------------------PROTEIN_KINAS---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: D:2-2-------------------------------------------------------------------------Exon 1.4  PDB: D:95-141 UniProt: 105-151       Exon 1.5  PDB: D:142-185 UniProt: 152-195   ---------------Exon 1.7  --------------------------------------------------Exon 1.9        Exon 1.10  PDB: D:277-301 Transcript 1 (1)
           Transcript 1 (2) -------------------Exon 1.3  PDB: D:21-95 UniProt: 31-105                                     -----------------------------------------------------------------------------------------Exon 1.6         --------Exon 1.8  PDB: D:210-261 UniProt: 220-271           ---------------------------------------- Transcript 1 (2)
                 2cke D   2 EPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYV 301
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2CKE)

(-) Gene Ontology  (24, 24)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (DAPK2_HUMAN | Q9UIK4)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0005516    calmodulin binding    Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
    GO:0004674    protein serine/threonine kinase activity    Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0043276    anoikis    Apoptosis triggered by inadequate or inappropriate adherence to substrate e.g. after disruption of the interactions between normal epithelial cells and the extracellular matrix.
    GO:0006915    apoptotic process    A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
    GO:0035556    intracellular signal transduction    The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
    GO:1990266    neutrophil migration    The movement of an neutrophil within or between different tissues and organs of the body.
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:2000424    positive regulation of eosinophil chemotaxis    Any process that activates or increases the frequency, rate or extent of eosinophil chemotaxis.
    GO:0090023    positive regulation of neutrophil chemotaxis    Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.
    GO:0046777    protein autophosphorylation    The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.
    GO:0042981    regulation of apoptotic process    Any process that modulates the occurrence or rate of cell death by apoptotic process.
    GO:0010506    regulation of autophagy    Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.
    GO:2001242    regulation of intrinsic apoptotic signaling pathway    Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway.
cellular component
    GO:0034423    autophagosome lumen    The volume enclosed within the autophagosome double-membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0031410    cytoplasmic vesicle    A vesicle found in the cytoplasm of a cell.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DAPK2_HUMAN | Q9UIK41wmk 1wrz 1z9x 1zuz 1zws 2a27 2a2a

(-) Related Entries Specified in the PDB File

1wmk HUMAN DEATH-ASSOCIATED KINASE DRP-1, MUTANT S308D D40
1wrz CALMODULIN COMPLEXED WITH A PEPTIDE FROM A HUMAN DEATH-ASSOCIATED PROTEIN KINASE