Chain A from PDB Type:PROTEIN Length:212
aligned with SCML2_HUMAN | Q9UQR0 from UniProtKB/Swiss-Prot Length:700
Alignment length:212
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
SCML2_HUMAN 32 DFHWEEYLKETGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTS 243
SCOP domains d2biva1 A:32-138 automated matches d2biva2 A:139-243 automated matches SCOP domains
CATH domains 2bivA01 A:32-58,A:163-243 2bivA02 A:59-162 [code=2.30.30.160, no name defined] 2bivA01 A:32-58,A:163-243 [code=2.30.30.160, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhh....hhhhh...............eeeeee..eeeeeeeeeeeeee..eeeeee........eeee.....ee..hhhhhh............hhhhhhhhhhhhhh.....hhhhh................eeeee.......eeeeeeeeee..eeeeee...hhhhheeee.....ee..hhhhhhh......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -MBT PDB: A:33-131 UniProt: 33-131 -------MBT PDB: A:139-240 UniProt: 139-240 --- PROSITE
Transcript 1 (1) -----------------------Exon 1.5 PDB: A:55-133 UniProt: 55-133 -----------------------------Exon 1.7 PDB: A:163-243 UniProt: 163-244 [INCOMPLETE] Transcript 1 (1)
Transcript 1 (2) Exon 1.4 PDB: A:32-54 ------------------------------------------------------------------------------Exon 1.6 PDB: A:133-162 --------------------------------------------------------------------------------- Transcript 1 (2)
2biv A 32 DFHWEEYLKETGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTS 243
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
Chain B from PDB Type:PROTEIN Length:211
aligned with SCML2_HUMAN | Q9UQR0 from UniProtKB/Swiss-Prot Length:700
Alignment length:217
36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236
SCML2_HUMAN 27 SVQRDDFHWEEYLKETGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTS 243
SCOP domains d2bivb1 B:27-133 automated matches ------d2bivb2 B:140-243 automated matches SCOP domains
CATH domains 2bivB01 B:27-58,B:163-243 2bivB02 B:59-162 [code=2.30.30.160, no name defined] 2bivB01 B:27-58,B:163-243 [code=2.30.30.160, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhhhhhhhh.....hhhhh...............eeeeee..eeeeeeeeeeeeee..eeeeee........eeee.....ee..hhhhhh.........------hhhhhhhhhhh.....hhhhh................eeeee.......eeeeeeeeee..eeeeee........eeee.....ee..hhhhhhh......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------MBT PDB: B:33-131 UniProt: 33-131 -------MBT PDB: B:140-240 UniProt: 139-240 --- PROSITE
Transcript 1 (1) 1.3 -----------------------Exon 1.5 PDB: B:55-133 UniProt: 55-133 -----------------------------Exon 1.7 PDB: B:163-243 UniProt: 163-244 [INCOMPLETE] Transcript 1 (1)
Transcript 1 (2) ----Exon 1.4 PDB: B:31-54 ------------------------------------------------------------------------------Exon 1.6 PDB: B:133-162 (gaps--------------------------------------------------------------------------------- Transcript 1 (2)
2biv B 27 SVQRDDFHWEEYLKETGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLG------SWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTS 243
36 46 56 66 76 86 96 106 116 126 | - | 146 156 166 176 186 196 206 216 226 236
133 140
Chain C from PDB Type:PROTEIN Length:193
aligned with SCML2_HUMAN | Q9UQR0 from UniProtKB/Swiss-Prot Length:700
Alignment length:212
41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241
SCML2_HUMAN 32 DFHWEEYLKETGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTS 243
SCOP domains d2bivc1 C:32-133 automated matches -------------------d2bivc2 C:153-243 automated matches SCOP domains
CATH domains 2bivC01 C:32-58,C:163-243 2bivC02 C:59-162 [code=2.30.30.160, no name defined] 2bivC01 C:32-58,C:163-243 [code=2.30.30.160, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhh.....hhhhh...............eeeeee..eeeeeeeeeeeeee..eeeeee........eeee.....ee..hhhhhh.........-------------------...hhhhh................eeeee.......eeeeeeeeee..eeeeee...hhhhheeee.....ee..hhhhhhh......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -MBT PDB: C:33-131 UniProt: 33-131 -------MBT PDB: C:153-240 UniProt: 139-240 --- PROSITE
Transcript 1 (1) -----------------------Exon 1.5 PDB: C:55-133 UniProt: 55-133 -----------------------------Exon 1.7 PDB: C:163-243 UniProt: 163-244 [INCOMPLETE] Transcript 1 (1)
Transcript 1 (2) Exon 1.4 PDB: C:32-54 ------------------------------------------------------------------------------Exon 1.6 PDB: C:133-162 (gaps--------------------------------------------------------------------------------- Transcript 1 (2)
2biv C 32 DFHWEEYLKETGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLG-------------------EMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTS 243
41 51 61 71 81 91 101 111 121 131 | - - | 161 171 181 191 201 211 221 231 241
133 153
Legend: |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |