Chain A from PDB Type:PROTEIN Length:221
aligned with NFCP_HETCR | Q95W85 from UniProtKB/Swiss-Prot Length:227
Alignment length:223
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
NFCP_HETCR 3 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFTGTQSMRIHVTEGAPLPFAFDILAPCCEYGSRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVLGTNFPADGPVMKNKSGGWEPCTEVVYPENGVLCGRNVMALKVGDRRLICHLYTSYRSKKAVRALTMPGFHFTDIRLQMPRKKKDEYFELYEASVARYSDLPEK 225
SCOP domains d1yzwa_ A: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--.....ee.....hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee..................eeeeeeee..eeeeeeeeeeee..eeeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee...eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yzw A 4 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFAGTQSMRIHVTEGAPLPFAFDILAPCCe--SRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVHGTNFPADGPVMKNKSGGWEPSTEVVYPENGVLCGRNVMALKVGDRHLICHHYTSYRSKKAVRALTMPGFHFTDIRLQMLRKKKDEYFELYEASVARYSDLPEK 226
13 23 33 43 53 63| | 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
64-CRU
Chain B from PDB Type:PROTEIN Length:221
aligned with NFCP_HETCR | Q95W85 from UniProtKB/Swiss-Prot Length:227
Alignment length:223
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
NFCP_HETCR 3 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFTGTQSMRIHVTEGAPLPFAFDILAPCCEYGSRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVLGTNFPADGPVMKNKSGGWEPCTEVVYPENGVLCGRNVMALKVGDRRLICHLYTSYRSKKAVRALTMPGFHFTDIRLQMPRKKKDEYFELYEASVARYSDLPEK 225
SCOP domains d1yzwb_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--.....ee.....hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee..................eeeeeeee..eeeeeeeeeeee..eeeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee...eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yzw B 4 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFAGTQSMRIHVTEGAPLPFAFDILAPCCe--SRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVHGTNFPADGPVMKNKSGGWEPSTEVVYPENGVLCGRNVMALKVGDRHLICHHYTSYRSKKAVRALTMPGFHFTDIRLQMLRKKKDEYFELYEASVARYSDLPEK 226
13 23 33 43 53 63| | 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
64-CRU
Chain C from PDB Type:PROTEIN Length:221
aligned with NFCP_HETCR | Q95W85 from UniProtKB/Swiss-Prot Length:227
Alignment length:223
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
NFCP_HETCR 3 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFTGTQSMRIHVTEGAPLPFAFDILAPCCEYGSRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVLGTNFPADGPVMKNKSGGWEPCTEVVYPENGVLCGRNVMALKVGDRRLICHLYTSYRSKKAVRALTMPGFHFTDIRLQMPRKKKDEYFELYEASVARYSDLPEK 225
SCOP domains d1yzwc_ C: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--.....ee.....hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee.....hhhhhh.......eeeeeeee..eeeeeeeeeeee..eeeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee...eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yzw C 4 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFAGTQSMRIHVTEGAPLPFAFDILAPCCe--SRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVHGTNFPADGPVMKNKSGGWEPSTEVVYPENGVLCGRNVMALKVGDRHLICHHYTSYRSKKAVRALTMPGFHFTDIRLQMLRKKKDEYFELYEASVARYSDLPEK 226
13 23 33 43 53 63| | 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
64-CRU
Chain D from PDB Type:PROTEIN Length:221
aligned with NFCP_HETCR | Q95W85 from UniProtKB/Swiss-Prot Length:227
Alignment length:223
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222
NFCP_HETCR 3 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFTGTQSMRIHVTEGAPLPFAFDILAPCCEYGSRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVLGTNFPADGPVMKNKSGGWEPCTEVVYPENGVLCGRNVMALKVGDRRLICHLYTSYRSKKAVRALTMPGFHFTDIRLQMPRKKKDEYFELYEASVARYSDLPEK 225
SCOP domains d1yzwd_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) GFP-1yzwD01 D:4-221 ----- Pfam domains (1)
Pfam domains (2) GFP-1yzwD02 D:4-221 ----- Pfam domains (2)
Pfam domains (3) GFP-1yzwD03 D:4-221 ----- Pfam domains (3)
Pfam domains (4) GFP-1yzwD04 D:4-221 ----- Pfam domains (4)
Sec.struct. author ......eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--.....ee.......hhhhh...eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee..................eeeeeeee..eeeeeeeeeeee..eeeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee...eeeeeeeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1yzw D 4 GLLKESMRIKMYMEGTVNGHYFKCEGEGDGNPFAGTQSMRIHVTEGAPLPFAFDILAPCCe--SRTFVHHTAEIPDFFKQSFPEGFTWERTTTYEDGGILTAHQDTSLEGNCLIYKVKVHGTNFPADGPVMKNKSGGWEPSTEVVYPENGVLCGRNVMALKVGDRHLICHHYTSYRSKKAVRALTMPGFHFTDIRLQMLRKKKDEYFELYEASVARYSDLPEK 226
13 23 33 43 53 63| | 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
64-CRU
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |