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(-) Description

Title :  SOLUTION STRUCTURE OF NORTHEAST STRUCTURAL GENOMICS TARGET PROTEIN BCR68 ENCODED IN GENE Q816V6 OF B. CEREUS
 
Authors :  G. Liu, T. Acton, D. Parish, L. Ma, D. Xu, R. Xiao, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  04 Oct 04  (Deposition) - 14 Dec 04  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Structural Genomics, Protein Structure Initiative, Psi, Nesg Target Protein Bcr68, Alpha + Beta, Gft Nmr, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Liu, Y. Shen, H. S. Atreya, D. Parish, Y. Shao, D. K. Sukumaran, R. Xiao, A. Yee, A. Lemak, A. Bhattacharya, T. A. Acton, C. H. Arrowsmith, G. T. Montelione, T. Szyperski
Nmr Data Collection And Analysis Protocol For High-Throughput Protein Structure Determination.
Proc. Natl. Acad. Sci. Usa V. 102 10487 2005
PubMed-ID: 16027363  |  Reference-DOI: 10.1073/PNAS.0504338102
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN BC4709
    Atcc: 14579
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: BACILLUS CEREUS
    Organism Taxid: 1396

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1XN6)

(-) Sites  (0, 0)

(no "Site" information available for 1XN6)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1XN6)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1XN6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1XN6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1XN6)

(-) Exons   (0, 0)

(no "Exon" information available for 1XN6)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:143
 aligned with Q816V6_BACCR | Q816V6 from UniProtKB/TrEMBL  Length:143

    Alignment length:143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   
         Q816V6_BACCR     1 MEQQNTLNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPNDFVLEVGHEFHVQSPFGPSPCKVLEIDEPNHLSFSWDTDGWVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNEKLKKVVEG 143
               SCOP domains d1xn6a_ A: Hypothetical protein BC4709                                                                                                          SCOP domains
               CATH domains 1xn6A00 A:1-143  [code=3.30.530.20, no name defined]                                                                                            CATH domains
               Pfam domains ----------------AHSA1-1xn6A01 A:17-142                                                                                                        - Pfam domains
         Sec.struct. author .........eeeeeee..hhhhhhhh...hhhhhh.............ee..........eeeeeee...eeeeee....eeeeeeeeeee..eeeeeeeee..............hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1xn6 A   1 MEQQNTLNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPNDFVLEVGHEFHVQSPFGPSPCKVLEIDEPNHLSFSWDTDGWVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNEKLKKVVEG 143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Bet_V_1_like (93)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (Q816V6_BACCR | Q816V6)
biological process
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

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 Related Entries

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