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(-) Description

Title :  CRYSTAL STRUCTURE OF PH1933 FROM PYROCOCCUS HORIKOSHII OT3
 
Authors :  Y. Asada, N. Kunishima, Riken Structural Genomics/Proteomics Ini (Rsgi)
Date :  19 Jan 05  (Deposition) - 01 Feb 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics, Pyrococcus Horikoshii Ot3, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Y. Asada, N. Kunishima
Crystal Structure Of Ph1933 From Pyrococcus Horikoshii Ot3
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN PH1933
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPET11A
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    Organism ScientificPYROCOCCUS HORIKOSHII
    Organism Taxid70601
    StrainOT3

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:27 , TYR A:28 , ILE A:88 , GLU A:90 , PHE A:91 , VAL A:92 , VAL A:93 , GLN A:98 , GLY A:99 , LYS A:100 , GLY A:101 , ILE A:102 , GLY A:103 , ARG A:104 , TRP A:124 , ASN A:129 , GLY A:131 , ASN A:134 , LEU A:135 , TYR A:136 , LYS A:138 , HOH A:1013 , HOH A:1016 , HOH A:1084 , HOH A:1116 , HOH A:1119 , HOH A:1155 , LYS B:142BINDING SITE FOR RESIDUE ACO A 1001
2AC2SOFTWARELYS A:155 , GLY B:27 , TYR B:28 , ILE B:88 , GLU B:90 , PHE B:91 , VAL B:92 , VAL B:93 , GLN B:98 , GLY B:99 , LYS B:100 , GLY B:101 , ILE B:102 , GLY B:103 , ARG B:104 , TRP B:124 , ASN B:129 , TYR B:136 , LYS B:138 , HOH B:1008 , HOH B:1014 , HOH B:1031 , HOH B:1045 , HOH B:1096 , HOH B:1098 , HOH B:1102 , HOH B:1109 , HOH B:1184 , HOH B:1205BINDING SITE FOR RESIDUE ACO B 1002

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1WWZ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1WWZ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1WWZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1WWZ)

(-) Exons   (0, 0)

(no "Exon" information available for 1WWZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:157
 aligned with O59596_PYRHO | O59596 from UniProtKB/TrEMBL  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
         O59596_PYRHO     1 MDEIKIEKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKRQ 157
               SCOP domains d1wwza1 A:1-157 Hypothetical protein PH1933                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee....hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh..eeeeee..eeeeeeeeeeeeee....eeeeeeeeeee.hhhh..hhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeee..eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wwz A   1 MDEIKIEKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKRQ 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       

Chain B from PDB  Type:PROTEIN  Length:157
 aligned with O59596_PYRHO | O59596 from UniProtKB/TrEMBL  Length:159

    Alignment length:157
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       
         O59596_PYRHO     3 EIKIEKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKRQNL 159
               SCOP domains d1wwzb_ B: Hypothetical protein PH1933                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------------------------------------------------Acetyltransf_1-1wwzB01 B:60-142                                                    ----------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------------Acetyltransf_1-1wwzB02 B:60-142                                                    ----------------- Pfam domains (2)
         Sec.struct. author .eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee..eeeeeeeeeeeeee....eeeeeeeeeee.hhhh..hhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhh..eeeeee..eeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1wwz B   3 EIKIEKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKRQNL 159
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       

   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1WWZ)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (O59596_PYRHO | O59596)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.

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