1W4N - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   AGAO COVALENT COMPLEX WITH TRANYLCYPROMINE

Authors :   A. P. Duff, D. M. Trambaiolo, D. B. Langley, G. A. Juda, E. M. Shepard, D. M H. C. Freeman, J. M. Guss

Date :   27 Jul 04 (Deposition) - 08 Dec 05 (Release) - 10 Aug 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.65

Chains :   Asym./Biol. Unit : A,B

Keywords :   Amine Oxidase, Arthrobacter Globiformis, Copper Containing, Metal-Binding, Oxidoreductase, Tcq, Quinone, Inhibited, Tcp, Tranylcypromine (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. B. Langley, D. M. Trambaiolo, A. P. Duff, D. M. Dooley, H. C. Freeman, J. M. Guss
Complexes Of The Copper-Containing Amine Oxidase From Arthrobacter Globiformis With The Inhibitors Benzylhydrazine And Tranylcypromine.
Acta Crystallogr. , Sect. F V. 64 577 2008
PubMed-ID: 18607080 | Reference-DOI: 10.1107/S174430910801556X

Molecule 1 - PHENYLETHYLAMINE OXIDASE
	Chains	:	A, B
	EC Number	:	1.4.3.6
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PAGAO2
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector	:	PET-3C (NOVAGEN)
	Organism Scientific	:	ARTHROBACTER GLOBIFORMIS
	Organism Taxid	:	1665
	Other Details	:	RESIDUES A382 AND B382 ARE ACTIVE SITE TYROSINE RESIDUES, WHICH WERE AUTOCATALYTICALLY MODIFIED TO BECOME TPQ, ARE COVALENTLY LINKED TO THE SUICIDE INHIBITOR TRANS-2-PHENYLCYCLOPROPYL-1-AMINE. THIS MODIFIED TPQ IS NAMED TCQ
	Synonym	:	ARTHROBACTER GLOBIFORMIS COPPER AMINE OXIDASE

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (5, 17)

No.	Name	Count	Type	Full Name
1	CU	2	Ligand/Ion	COPPER (II) ION
2	GOL	9	Ligand/Ion	GLYCEROL
3	NA	2	Ligand/Ion	SODIUM ION
4	SO4	2	Ligand/Ion	SULFATE ION
5	TCQ	2	Mod. Amino Acid	(1S,2R)-N-{(1E)-5-[(2S)-2-AMINO-2-CARBOXYETHYL]-2-HYDROXY-4-OXOCYCLOHEXA-2,5-DIEN-1-YLIDENE}-2-PHENYLCYCLOPROPANAMINIUM

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS A:431 , HIS A:433 , HIS A:592 , HOH A:2332 , HOH A:2334	BINDING SITE FOR RESIDUE CU A 701
02	AC2	SOFTWARE	ASP A:440 , MET A:441 , ASP A:581 , ILE A:582 , HOH A:2337	BINDING SITE FOR RESIDUE NA A 703
03	AC3	SOFTWARE	GLY A:350 , ARG A:367 , HOH A:2490 , HOH A:2491 , HOH A:2492 , ASP B:316 , CYS B:317 , LEU B:318 , HIS B:345 , HOH B:2297 , HOH B:2329	BINDING SITE FOR RESIDUE SO4 A 711
04	AC4	SOFTWARE	HIS B:431 , HIS B:433 , HIS B:592 , HOH B:2327 , HOH B:2358	BINDING SITE FOR RESIDUE CU B 701
05	AC5	SOFTWARE	ASP B:440 , MET B:441 , ASP B:581 , ILE B:582 , HOH B:2363	BINDING SITE FOR RESIDUE NA B 703
06	AC6	SOFTWARE	ASP A:316 , CYS A:317 , LEU A:318 , HIS A:345 , HOH A:2272 , HOH A:2303 , GLY B:350 , ARG B:367 , HOH B:2534 , HOH B:2535 , HOH B:2536	BINDING SITE FOR RESIDUE SO4 B 711
07	AC7	SOFTWARE	ASP A:161 , HIS A:170 , VAL A:197 , ALA A:199 , HOH A:2493	BINDING SITE FOR RESIDUE GOL A 751
08	AC8	SOFTWARE	LEU A:590 , ASP A:605 , THR A:606 , HIS B:515 , ARG B:612	BINDING SITE FOR RESIDUE GOL A 752
09	AC9	SOFTWARE	SER A:620 , PRO A:621 , VAL A:622 , LEU A:623 , ASP A:624 , HOH A:2227 , HOH A:2495 , HOH A:2496 , LEU B:209	BINDING SITE FOR RESIDUE GOL A 753
10	BC1	SOFTWARE	ASP A:444 , GLY A:445 , PHE A:446 , THR A:447 , ASN A:499	BINDING SITE FOR RESIDUE GOL A 755
11	BC2	SOFTWARE	ASN B:126 , ASP B:161 , HIS B:170 , VAL B:197 , PRO B:198 , ALA B:199 , HOH B:2537 , HOH B:2538	BINDING SITE FOR RESIDUE GOL B 751
12	BC3	SOFTWARE	HIS A:515 , ARG A:612 , HOH A:2480 , LEU B:590 , ASP B:605 , THR B:606	BINDING SITE FOR RESIDUE GOL B 752
13	BC4	SOFTWARE	LEU A:209 , THR A:210 , SER B:620 , PRO B:621 , VAL B:622 , LEU B:623 , ASP B:624	BINDING SITE FOR RESIDUE GOL B 753
14	BC5	SOFTWARE	ARG B:532 , ARG B:533 , THR B:554 , PHE B:557 , HIS B:561 , SER B:562 , GLY B:563 , GLY B:564 , ALA B:565 , HOH B:2468	BINDING SITE FOR RESIDUE GOL B 754
15	BC6	SOFTWARE	ASP B:444 , GLY B:445 , PHE B:446 , THR B:447 , ASN B:499	BINDING SITE FOR RESIDUE GOL B 755

Asymmetric/Biological Unit

No.	Residues
1	A:317	-	A:343
2	B:317	-	B:343

Asymmetric/Biological Unit

No.	Residues
1	Trp A:599	-	Pro A:600
2	Trp B:599	-	Pro B:600

(no "SAP(SNP)/Variant" information available for 1W4N)

Asymmetric/Biological Unit (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	COPPER_AMINE_OXID_1	PS01164	Copper amine oxidase topaquinone signature.	PAOX_ARTGO	371-384	2	A:371-384 B:371-384
2	COPPER_AMINE_OXID_2	PS01165	Copper amine oxidase copper-binding site signature.	PAOX_ARTGO	587-600	2	A:587-600 B:587-600

(no "Exon" information available for 1W4N)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:619
 aligned with PAOX_ARTGO | P46881 from UniProtKB/Swiss-Prot  Length:638

    Alignment length:619
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618         
           PAOX_ARTGO     9 ASPFRLASAGEISEVQGILRTAGLLGPEKRIAYLGVLDPARGAGSEAEDRRFRVFIHDVSGARPQEVTVSVTNGTVISAVELDTAATGELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPAEHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDVPA 627
               SCOP domains d1w4na2 A:9-96 Copper amine oxidase, domains 1 and 2                                    d1w4na3 A:97-211 Copper amine oxidase, domains 1 and 2                                                             d1w4na1 A:212-627 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 1w4nA01 A:9-95  [code=3.10.450.40, no name defined]                                    ------1w4nA02 A:102-203  [code=3.10.450.40, no name defined]                                                1w4nA03 A:204-627 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhh......eeeeeeee.....hhhhh....eeeeeeee......eeeeee....eeeeeee.hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeee.....hhhhh...eeeeeeee......hhhh.eeeeeeeeee....eeeeeee..............hhhhhh.........eee.......eee...eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee...........eee.....hhhhh..............eee..eee.....eee....eeeeeeeeeeeeeee......eeeeeeeeeeeeeee......eeeeeeee....eeeeeee......ee........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee............eeeeeee...hhh.ee..hhhhh.eeeeeeeeee.....eeeeeeee...........hhhhhhhhhhhh.eeeee....................hhhhhhh.........eeeeeeeeeee..hhhhh.....eeeeeeeee.............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O--------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w4n A   9 ASPFRLASAGEISEVQGILRTAGLLGPEKRIAYLGVLDPARGAGSEAEDRRFRVFIHDVSGARPQEVTVSVTNGTVISAVELDTAATGELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPAEHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRMVISFFTTIGNyDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDVPA 627
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378   |   388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618         
                                                                                                                                                                                                                                                                                                                                                                                                               382-TCQ

Chain B from PDB  Type:PROTEIN  Length:619
 aligned with PAOX_ARTGO | P46881 from UniProtKB/Swiss-Prot  Length:638

    Alignment length:619
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618         
           PAOX_ARTGO     9 ASPFRLASAGEISEVQGILRTAGLLGPEKRIAYLGVLDPARGAGSEAEDRRFRVFIHDVSGARPQEVTVSVTNGTVISAVELDTAATGELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPAEHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDVPA 627
               SCOP domains d1w4nb2 B:9-96 Copper amine oxidase, domains 1 and 2                                    d1w4nb3 B:97-211 Copper amine oxidase, domains 1 and 2                                                             d1w4nb1 B:212-627 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains 1w4nB01 B:9-95  [code=3.10.450.40, no name defined]                                    ------1w4nB02 B:102-203  [code=3.10.450.40, no name defined]                                                1w4nB03 B:204-627 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                         CATH domains
           Pfam domains (1) -----------------------------------------------------------------------------------------Cu_amine_oxidN3-1w4nB01 B:98-198                                                                     --------------------Cu_amine_oxid-1w4nB03 B:219-627                                                                                                                                                                                                                                                                                                                                                                                           Pfam domains (1)
           Pfam domains (2) -----------------------------------------------------------------------------------------Cu_amine_oxidN3-1w4nB02 B:98-198                                                                     --------------------Cu_amine_oxid-1w4nB04 B:219-627                                                                                                                                                                                                                                                                                                                                                                                           Pfam domains (2)
         Sec.struct. author .......hhhhhhhhhhhhhhh......eeeeeeee..............eeeeeeee......eeeeee....eeeeeee.hhhhhh....hhhhhhhhhhhhh.hhhhhhhhhhh..hhh.eeeeeee.....hhhhh...eeeeeeee......hhhhh....eeeeee....eeeeeee..............hhhhhh.........eee.......eee...eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee...........eee.....hhhhh..............eee..eee.....eee....eeeeeeeeeeeeeee......eeeeeeeeeeeeeee......eeeeeeee....eeeeeeeee....ee........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee............eeeeeee...hhh.ee..hhhhh.eeeeeeeeee.....eeeeeeee...........hhhhhhhhhhhh.eeeee....................hhhhhhh.........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O--------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w4n B   9 ASPFRLASAGEISEVQGILRTAGLLGPEKRIAYLGVLDPARGAGSEAEDRRFRVFIHDVSGARPQEVTVSVTNGTVISAVELDTAATGELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPAEHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRMVISFFTTIGNyDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDVPA 627
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378   |   388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618         
                                                                                                                                                                                                                                                                                                                                                                                                               382-TCQ

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Supersandwich (271)

Superfamily: Amine oxidase catalytic domain (65)

Family: Amine oxidase catalytic domain (65)

Protein domain: Copper amine oxidase, domain 3 (62)

Arthrobacter globiformis [TaxId: 1665] (40)

1a	d1w4na1	A:212-627
1b	d1w4nb1	B:212-627

Class: Alpha and beta proteins (a+b) (23004)

Fold: Cystatin-like (403)

Superfamily: Amine oxidase N-terminal region (65)

Family: Amine oxidase N-terminal region (65)

Protein domain: Copper amine oxidase, domains 1 and 2 (62)

Arthrobacter globiformis [TaxId: 1665] (40)

2a	d1w4na2	A:9-96
2b	d1w4na3	A:97-211
2c	d1w4nb2	B:9-96
2d	d1w4nb3	B:97-211

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Roll (3276)

Topology: Nuclear Transport Factor 2; Chain: A, (517)

Homologous Superfamily: [code=3.10.450.40, no name defined] (77)

Arthrobacter globiformis. Organism_taxid: 1665. (34)

1a	1w4nA02	A:102-203
1b	1w4nB02	B:102-203
1c	1w4nA01	A:9-95
1d	1w4nB01	B:9-95

Class: Mainly Beta (13760)

Architecture: Distorted Sandwich (506)

Topology: Beta-galactosidase; Chain A, domain 5 (250)

Homologous Superfamily: Copper amine oxidase, Domain 3 (74)

Arthrobacter globiformis. Organism_taxid: 1665. (34)

2a	1w4nA03	A:204-627
2b	1w4nB03	B:204-627

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: CuAO_N2_N3 (40)

Family: Cu_amine_oxidN3 (37)

Arthrobacter globiformis (13)

1a	Cu_amine_oxidN3-1w4nB01	B:98-198
1b	Cu_amine_oxidN3-1w4nB02	B:98-198

Clan: no clan defined [family: Cu_amine_oxid] (40)

Family: Cu_amine_oxid (40)

Arthrobacter globiformis (13)

2a	Cu_amine_oxid-1w4nB03	B:219-627
2b	Cu_amine_oxid-1w4nB04	B:219-627

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (PAOX_ARTGO | P46881)

molecular function
	GO:0052595	aliphatic-amine oxidase activity	Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.
	GO:0052594	aminoacetone:oxygen oxidoreductase(deaminating) activity	Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.
	GO:0005507	copper ion binding	Interacting selectively and non-covalently with copper (Cu) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0052596	phenethylamine:oxygen oxidoreductase (deaminating) activity	Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.
	GO:0008131	primary amine oxidase activity	Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.
	GO:0048038	quinone binding	Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
	GO:0052593	tryptamine:oxygen oxidoreductase (deaminating) activity	Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.
biological process
	GO:0009308	amine metabolic process	The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric/Biological Unit
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Trp A:599 - Pro A:600	[ RasMol ]
		Trp B:599 - Pro B:600	[ RasMol ]

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Access by PDB/NDB ID
	1w4n
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
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Access by UniProt ID/Accession number
	PAOX_ARTGO \| P46881
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Access by Enzyme Classificator (EC Number)
	1.4.3.6
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		Interatomic Contacts of Structural Units	:	CSU
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	PAOX_ARTGO \| P46881
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1av4	CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO- AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE
1avk	CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO- AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE
1avl	CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO- AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE
1iqx	CRYSTAL STRUCTURE OF COBALT-SUBSTITUTED AMINE OXIDASE FROMARTHROBACTER GLOBIFORMIS
1iqy	CRYSTAL STRUCTURE OF NICKEL-SUBSTITUTED AMINE OXIDASE FROMARTHROBACTER GLOBIFORMIS
1iu7	HOLO FORM OF COPPER-CONTAINING AMINE OXIDASE FROMARTHROBACTER GLOBIFORMIS
1ivu	CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTERGLOBIFORMIS: INITIAL INTERMEDIATE IN TOPAQUINONE BIOGENESIS
1ivv	CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTERGLOBIFORMIS: EARLY INTERMEDIATE IN TOPAQUINONE BIOGENESIS
1ivw	CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTERGLOBIFORMIS: LATE INTERMEDIATE IN TOPAQUINONE BIOGENESIS
1ivx	CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE FROM ARTHROBACTERGLOBIFORMIS: HOLO FORM GENERATED BY BIOGENESIS IN CRYSTAL.
1rjo	AGAO + XE
1sih	AGAO IN COVALENT COMPLEX WITH THE INHIBITOR MOBA ("4-(4-METHYLPHENOXY)-2-BUTYN-1- AMINE")
1sii	AGAO IN COVALENT COMPLEX WITH THE INHIBITOR NOBA ("4-(2-NAPHTHYLOXY)-2-BUTYN-1-AMINE")
1ui7	SITE-DIRECTED MUTAGENESIS OF HIS433 INVOLVED IN BINDING OFCOPPER ION IN ARTHROBACTER GLOBIFORMIS AMINE OXIDASE
1ui8	SITE-DIRECTED MUTAGENESIS OF HIS592 INVOLVED IN BINDING OFCOPPER ION IN ARTHROBACTER GLOBIFORMIS AMINE OXIDASE
1w5z	AGAO COVALENT COMPLEX WITH BENZYLHYDRAZINE
1w6c	AGAO HOLOENZYME IN A SMALL CELL, AT 2.2 ANGSTROMS
1w6g	AGAO HOLOENZYME AT 1.55 ANGSTROMS
1wmn	CRYSTAL STRUCTURE OF TOPAQUINONE-CONTAINING AMINE OXIDASEACTIVATED BY COBALT ION
1wmo	CRYSTAL STRUCTURE OF TOPAQUINONE-CONTAINING AMINE OXIDASEACTIVATED BY NICKEL ION
1wmp	CRYSTAL STRUCTURE OF AMINE OXIDASE COMPLEXED WITH COBALT ION
2bt3	AGAO IN COMPLEX WITH RUTHENIUM-C4-WIRE AT 1.73 ANGSTROMS

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 17)

Sites (15, 15)

SS Bonds (2, 2)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 6)

CATH Domains (2, 6)

Pfam Domains (2, 4)

Gene Ontology (11, 11)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File