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(-) Description

Title :  THE CRYSTAL STRUCTURE OF THE BACTERIAL CELL DIVISION PROTEIN ZAPA
 
Authors :  H. H. Low, M. C. Moncrieffe, J. Lowe
Date :  01 Jul 04  (Deposition) - 19 Jul 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Bacterial Cell Division, Ftsz Modulator (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. H. Low, M. C. Moncrieffe, J. Lowe
The Crystal Structure Of Zapa And Its Modulation Of Ftsz Polymerisation
J. Mol. Biol. V. 341 839 2004
PubMed-ID: 15288790  |  Reference-DOI: 10.1016/J.JMB.2004.05.031

(-) Compounds

Molecule 1 - ZAPA
    Atcc: 47085D
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHIS17
    Expression System Strain: C41(DE3)
    Expression System Taxid: 562
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Strain: PA01-LAC
    Synonym: HYPOTHETICAL PROTEIN PA5227

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 1W2E)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1W2E)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1W2E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1W2E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1W2E)

(-) Exons   (0, 0)

(no "Exon" information available for 1W2E)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:92
 aligned with ZAPA_PSEAE | Q9HTW3 from UniProtKB/Swiss-Prot  Length:104

    Alignment length:92
                                    14        24        34        44        54        64        74        84        94  
            ZAPA_PSEAE    5 NTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALA 96
               SCOP domains d1w2ea_ A: ZapA homologue PA5227                                                             SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..eeeeee.hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                  1w2e A  5 NTLTVQILDKEYCINCPDDERANLESAARYLDGKmREIRSSGKVIGADRVAVmAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALA 96
                                    14        24        34    |   44        54  |     64        74        84        94  
                                                             39-MSE            57-MSE                                   


Chain B from PDB  Type:PROTEIN  Length:92
 aligned with ZAPA_PSEAE | Q9HTW3 from UniProtKB/Swiss-Prot  Length:104

    Alignment length:92
                                    15        25        35        45        55        65        75        85        95  
            ZAPA_PSEAE    6 TLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALAN 97
               SCOP domains d1w2eb_ B: ZapA homologue PA5227                                                             SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ZapA-1w2eB01 B:6-92                                                                    ----- Pfam domains (1)
           Pfam domains (2) ZapA-1w2eB02 B:6-92                                                                    ----- Pfam domains (2)
         Sec.struct. author .eeee....eeee..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                  1w2e B  6 TLTVQILDKEYCINCPDDERANLESAARYLDGKmREIRSSGKVIGADRVAVmAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALAN 97
                                    15        25        35   |    45        55 |      65        75        85        95  
                                                            39-MSE            57-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1W2E)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: no clan defined [family: ZapA] (2)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (ZAPA_PSEAE | Q9HTW3)
biological process
    GO:0007049    cell cycle    The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
    GO:0051301    cell division    The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ZAPA_PSEAE | Q9HTW3: 1t3u

(-) Related Entries Specified in the PDB File

1t3u UNKNOWN CONSERVED BACTERIAL PROTEIN FROM PSEUDOMONASAERUGINOSA PAO1