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(-) Description

Title :  PAF-AH HOLOENZYME: LIS1/ALFA2
 
Authors :  C. Tarricone, F. Perrina, S. Monzani, L. Massimiliano, S. Knapp, L. -H. Tsai, Z. S. Derewenda, A. Musacchio
Date :  30 Apr 04  (Deposition) - 26 May 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.40
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Biol. Unit 3:  I,J,K,L  (1x)
Biol. Unit 4:  M,N,O,P  (1x)
Biol. Unit 5:  Q,R,S,T  (1x)
Keywords :  Lissencephaly, Acetylhydrolase, Platelet Activacting Factor, Regulator Of Cytoplasmic Dynein, Hydrolase, Cell Division, Mitosis, Neurogenesis, Cytoskeleton (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. Tarricone, F. Perrina, S. Monzani, L. Massimiliano, M. H. Kim, Z. S. Derewenda, S. Knapp, L. -H. Tsai, A. Musacchio
Coupling Paf Signaling To Dynein Regulation: Structure Of Lis1 In Complex With Paf- Acetylhydrolase.
Neuron V. 44 809 2004
PubMed-ID: 15572112  |  Reference-DOI: 10.1016/J.NEURON.2004.11.019

(-) Compounds

Molecule 1 - PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB ALPHA SUBUNIT
    ChainsC, D, G, H, K, L, O, P, S, T
    EngineeredYES
    Expression SystemSPODOPTERA FRUGIPERDA
    Expression System PlasmidPFASTBAC-HTB
    Expression System StrainSF9
    Expression System Taxid7108
    Expression System Vector TypeBACULOVIRUS
    FragmentC-TERM BETA-PROPELLER, RESIDUES 1-229
    OrganBRAIN
    Organism CommonMOUSE
    Organism ScientificMUS MUSCULUS
    Organism Taxid10090
    SynonymPAF ACETYLHYDROLASE 45 KDA SUBUNIT, PAF-AH 45 KDA SUBUNIT, PAF-AH ALPHA, PAFAH ALPHA, LISSENCEPHALY-1 PROTEIN, LIS-1, PAF-AH 45 KD SUBUNIT
 
Molecule 2 - PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT
    ChainsA, B, E, F, I, J, M, N, Q, R
    EC Number3.1.1.47
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX6P1
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPLATELET-ACTIVATING FACTOR ACETYLHYDROLASE, PAF ACETYLHYDROLASE 30 KDA SUBUNIT, PAF-AH 30 KDA SUBUNIT, PAF-AH BETA SUBUNIT, PAFAH BETA SUBUNIT

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric Unit ABCDEFGHIJKLMNOPQRST
Biological Unit 1 (1x)ABCD                
Biological Unit 2 (1x)    EFGH            
Biological Unit 3 (1x)        IJKL        
Biological Unit 4 (1x)            MNOP    
Biological Unit 5 (1x)                QRST

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1VYH)

(-) Sites  (0, 0)

(no "Site" information available for 1VYH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1VYH)

(-) Cis Peptide Bonds  (10, 10)

Asymmetric Unit
No.Residues
1Asp C:129 -Ala C:130
2Asp D:129 -Ala D:130
3Asp G:129 -Ala G:130
4Asp H:129 -Ala H:130
5Asp K:129 -Ala K:130
6Asp L:129 -Ala L:130
7Asp O:129 -Ala O:130
8Asp P:129 -Ala P:130
9Asp S:129 -Ala S:130
10Asp T:129 -Ala T:130

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1VYH)

(-) PROSITE Motifs  (1, 40)

Asymmetric Unit (1, 40)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1WD_REPEATS_1PS00678 Trp-Asp (WD) repeats signature.LIS1_MOUSE165-179
 
 
 
 
 
 
 
 
 
207-221
 
 
 
 
 
 
 
 
 
311-325
 
 
 
 
 
 
 
 
 
395-409
 
 
 
 
 
 
 
 
 
  40C:165-179
D:165-179
G:165-179
H:165-179
K:165-179
L:165-179
O:165-179
P:165-179
S:165-179
T:165-179
C:207-221
D:207-221
G:207-221
H:207-221
K:207-221
L:207-221
O:207-221
P:207-221
S:207-221
T:207-221
C:311-325
D:311-325
G:311-325
H:311-325
K:311-325
L:311-325
O:311-325
P:311-325
S:311-325
T:311-325
C:395-408
D:395-408
G:395-408
H:395-408
K:395-408
L:395-408
O:395-408
P:395-408
S:395-408
T:395-408
Biological Unit 1 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1WD_REPEATS_1PS00678 Trp-Asp (WD) repeats signature.LIS1_MOUSE165-179
 
 
 
 
 
 
 
 
 
207-221
 
 
 
 
 
 
 
 
 
311-325
 
 
 
 
 
 
 
 
 
395-409
 
 
 
 
 
 
 
 
 
  8C:165-179
D:165-179
-
-
-
-
-
-
-
-
C:207-221
D:207-221
-
-
-
-
-
-
-
-
C:311-325
D:311-325
-
-
-
-
-
-
-
-
C:395-408
D:395-408
-
-
-
-
-
-
-
-
Biological Unit 2 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1WD_REPEATS_1PS00678 Trp-Asp (WD) repeats signature.LIS1_MOUSE165-179
 
 
 
 
 
 
 
 
 
207-221
 
 
 
 
 
 
 
 
 
311-325
 
 
 
 
 
 
 
 
 
395-409
 
 
 
 
 
 
 
 
 
  8-
-
G:165-179
H:165-179
-
-
-
-
-
-
-
-
G:207-221
H:207-221
-
-
-
-
-
-
-
-
G:311-325
H:311-325
-
-
-
-
-
-
-
-
G:395-408
H:395-408
-
-
-
-
-
-
Biological Unit 3 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1WD_REPEATS_1PS00678 Trp-Asp (WD) repeats signature.LIS1_MOUSE165-179
 
 
 
 
 
 
 
 
 
207-221
 
 
 
 
 
 
 
 
 
311-325
 
 
 
 
 
 
 
 
 
395-409
 
 
 
 
 
 
 
 
 
  8-
-
-
-
K:165-179
L:165-179
-
-
-
-
-
-
-
-
K:207-221
L:207-221
-
-
-
-
-
-
-
-
K:311-325
L:311-325
-
-
-
-
-
-
-
-
K:395-408
L:395-408
-
-
-
-
Biological Unit 4 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1WD_REPEATS_1PS00678 Trp-Asp (WD) repeats signature.LIS1_MOUSE165-179
 
 
 
 
 
 
 
 
 
207-221
 
 
 
 
 
 
 
 
 
311-325
 
 
 
 
 
 
 
 
 
395-409
 
 
 
 
 
 
 
 
 
  8-
-
-
-
-
-
O:165-179
P:165-179
-
-
-
-
-
-
-
-
O:207-221
P:207-221
-
-
-
-
-
-
-
-
O:311-325
P:311-325
-
-
-
-
-
-
-
-
O:395-408
P:395-408
-
-
Biological Unit 5 (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1WD_REPEATS_1PS00678 Trp-Asp (WD) repeats signature.LIS1_MOUSE165-179
 
 
 
 
 
 
 
 
 
207-221
 
 
 
 
 
 
 
 
 
311-325
 
 
 
 
 
 
 
 
 
395-409
 
 
 
 
 
 
 
 
 
  8-
-
-
-
-
-
-
-
S:165-179
T:165-179
-
-
-
-
-
-
-
-
S:207-221
T:207-221
-
-
-
-
-
-
-
-
S:311-325
T:311-325
-
-
-
-
-
-
-
-
S:395-408
T:395-408

(-) Exons   (0, 0)

(no "Exon" information available for 1VYH)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyha1 A:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhA00 A:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh A   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain A from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyha1 A:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhA00 A:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh A   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain B from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhb1 B:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhB00 B:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh B   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain B from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhb1 B:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhB00 B:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh B   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain C from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhc1 C:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee......eeeeee...hhhhhhhhh....-------..eeeeee...eeeeee....eeeeeee.....eeeeee......eeeee...eeeee........eeee.....eeeeee......eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh C  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain D from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhd1 D:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee..........ee...hhhhhhhhh....-------...eeee....eee............ee.....eeeeee......eeeee...eeeee........eeee.....eeeeee......eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh D  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain E from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhe1 E:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhE00 E:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh E   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain E from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhe1 E:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhE00 E:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh E   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain F from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhf1 F:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhF00 F:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh F   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain F from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhf1 F:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhF00 F:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh F   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain G from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhg1 G:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee......eeeeee...hhhhhhhhh....-------..eeeeee...eeeeee....eeeeeee.....eeee........eeeee...eeeee......eeeeee.....eeeeee......eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh G  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain H from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhh1 H:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eee......eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee.....eeee.....eeee.......eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee......eeeeee...hhhhhhhhh....-------..eeeeee...eeeeee....eeeeeee.....eeeeee......eeeee...eeee.........eeee.....eeeeee......eeeee....eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh H  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain I from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhi1 I:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhI00 I:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh I   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain I from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhi1 I:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhI00 I:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh I   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain J from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhj1 J:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhJ00 J:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh J   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain J from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhj1 J:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhJ00 J:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh J   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain K from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhk1 K:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee......eeeeee...hhhhhhhhh....-------..eeeeee...eeeeee....eeeeeee.....eeeeee.....eeeeee....eeeee.......eee........eeee......eeee....eeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh K  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain L from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhl1 L:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eee......eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee..........ee...hhhhhhhhh....-------..eeeee....eeeeee....eeeeeee.....eeeeee......eeeee...eeeeeehhhheeeeeee.....eeeeee......eeeee....eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh L  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain M from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhm1 M:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhM00 M:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh M   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain M from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhm1 M:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhM00 M:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh M   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain N from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhn1 N:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhN00 N:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh N   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain N from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhn1 N:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhN00 N:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh N   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain O from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyho1 O:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee......eeeeee...hhhhhhhhh....-------..eeeeee...eeeeee....eeeeeee.....eeeeee.....eeeeee...eeeeee.......eeee.....eeeee........eeee...eeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh O  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain P from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhp1 P:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee......eeeeee...hhhhhhhhh....-------..eeeeee...eeeeee....eeeeeee.....eeee........eeeee....eeeee....eeeeee......eeeeee......eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh P  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain Q from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhq1 Q:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhQ00 Q:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh Q   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain Q from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhq1 Q:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhQ00 Q:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh Q   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain R from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_BOVIN | P68401 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_BOVIN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhr1 R:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhR00 R:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
           Pfam domains (1) -------------------------------------Lipase_GDSL_2-1vyhR01 R:43-205                                                                                                                                     ------------------ Pfam domains (1)
           Pfam domains (2) -------------------------------------Lipase_GDSL_2-1vyhR02 R:43-205                                                                                                                                     ------------------ Pfam domains (2)
           Pfam domains (3) -------------------------------------Lipase_GDSL_2-1vyhR03 R:43-205                                                                                                                                     ------------------ Pfam domains (3)
           Pfam domains (4) -------------------------------------Lipase_GDSL_2-1vyhR04 R:43-205                                                                                                                                     ------------------ Pfam domains (4)
           Pfam domains (5) -------------------------------------Lipase_GDSL_2-1vyhR05 R:43-205                                                                                                                                     ------------------ Pfam domains (5)
           Pfam domains (6) -------------------------------------Lipase_GDSL_2-1vyhR06 R:43-205                                                                                                                                     ------------------ Pfam domains (6)
           Pfam domains (7) -------------------------------------Lipase_GDSL_2-1vyhR07 R:43-205                                                                                                                                     ------------------ Pfam domains (7)
           Pfam domains (8) -------------------------------------Lipase_GDSL_2-1vyhR08 R:43-205                                                                                                                                     ------------------ Pfam domains (8)
           Pfam domains (9) -------------------------------------Lipase_GDSL_2-1vyhR09 R:43-205                                                                                                                                     ------------------ Pfam domains (9)
          Pfam domains (10) -------------------------------------Lipase_GDSL_2-1vyhR10 R:43-205                                                                                                                                     ------------------ Pfam domains (10)
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh R   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain R from PDB  Type:PROTEIN  Length:218
 aligned with PA1B2_HUMAN | P68402 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:218
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        
          PA1B2_HUMAN     6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
               SCOP domains d1vyhr1 R:6-217 Platelet-activating factor acetylhydrolase                                                                                                                                                          ------ SCOP domains
               CATH domains 1vyhR00 R:6-223  [code=3.40.50.1110, no name defined]                                                                                                                                                                      CATH domains
           Pfam domains (1) -------------------------------------Lipase_GDSL_2-1vyhR01 R:43-205                                                                                                                                     ------------------ Pfam domains (1)
           Pfam domains (2) -------------------------------------Lipase_GDSL_2-1vyhR02 R:43-205                                                                                                                                     ------------------ Pfam domains (2)
           Pfam domains (3) -------------------------------------Lipase_GDSL_2-1vyhR03 R:43-205                                                                                                                                     ------------------ Pfam domains (3)
           Pfam domains (4) -------------------------------------Lipase_GDSL_2-1vyhR04 R:43-205                                                                                                                                     ------------------ Pfam domains (4)
           Pfam domains (5) -------------------------------------Lipase_GDSL_2-1vyhR05 R:43-205                                                                                                                                     ------------------ Pfam domains (5)
           Pfam domains (6) -------------------------------------Lipase_GDSL_2-1vyhR06 R:43-205                                                                                                                                     ------------------ Pfam domains (6)
           Pfam domains (7) -------------------------------------Lipase_GDSL_2-1vyhR07 R:43-205                                                                                                                                     ------------------ Pfam domains (7)
           Pfam domains (8) -------------------------------------Lipase_GDSL_2-1vyhR08 R:43-205                                                                                                                                     ------------------ Pfam domains (8)
           Pfam domains (9) -------------------------------------Lipase_GDSL_2-1vyhR09 R:43-205                                                                                                                                     ------------------ Pfam domains (9)
          Pfam domains (10) -------------------------------------Lipase_GDSL_2-1vyhR10 R:43-205                                                                                                                                     ------------------ Pfam domains (10)
         Sec.struct. author .hhhhh..........hhhhhhhhhhhhhhhhh...eeeeehhhhhhhh.hhhhhhhhhhh.eeeee....hhhhhhhhhhh.........eeeee........hhhhhhhhhhhhhhhhhhhh...eeeee.........hhhhhhhhhhhhhhhhhh.....eeee........................hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh R   6 SNPAAIPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLHLTGGGYAKICKPLHELIMQLLEETPEE 223
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215        

Chain S from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyhs1 S:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee..........ee...hhhhhhhhh....-------..eeee......eeeee....eeeeee......eeeeee......eeeee....eee.........eee......eeeeee......eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh S  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

Chain T from PDB  Type:PROTEIN  Length:310
 aligned with LIS1_MOUSE | P63005 from UniProtKB/Swiss-Prot  Length:410

    Alignment length:317
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       
           LIS1_MOUSE    92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
               SCOP domains d1vyht1 T:92-408 Platelet-activating factor acetylhydrolase IB subunit alpha                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT01 T:370-408                  Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT02 T:370-408                  Pfam domains (2)
           Pfam domains (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT03 T:370-408                  Pfam domains (3)
           Pfam domains (4) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT04 T:370-408                  Pfam domains (4)
           Pfam domains (5) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT05 T:370-408                  Pfam domains (5)
           Pfam domains (6) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT06 T:370-408                  Pfam domains (6)
           Pfam domains (7) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT07 T:370-408                  Pfam domains (7)
           Pfam domains (8) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT08 T:370-408                  Pfam domains (8)
           Pfam domains (9) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT09 T:370-408                  Pfam domains (9)
          Pfam domains (10) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT10 T:370-408                  Pfam domains (10)
          Pfam domains (11) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT11 T:370-408                  Pfam domains (11)
          Pfam domains (12) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT12 T:370-408                  Pfam domains (12)
          Pfam domains (13) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT13 T:370-408                  Pfam domains (13)
          Pfam domains (14) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT14 T:370-408                  Pfam domains (14)
          Pfam domains (15) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT15 T:370-408                  Pfam domains (15)
          Pfam domains (16) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT16 T:370-408                  Pfam domains (16)
          Pfam domains (17) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT17 T:370-408                  Pfam domains (17)
          Pfam domains (18) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT18 T:370-408                  Pfam domains (18)
          Pfam domains (19) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT19 T:370-408                  Pfam domains (19)
          Pfam domains (20) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT20 T:370-408                  Pfam domains (20)
          Pfam domains (21) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT21 T:370-408                  Pfam domains (21)
          Pfam domains (22) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT22 T:370-408                  Pfam domains (22)
          Pfam domains (23) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT23 T:370-408                  Pfam domains (23)
          Pfam domains (24) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT24 T:370-408                  Pfam domains (24)
          Pfam domains (25) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT25 T:370-408                  Pfam domains (25)
          Pfam domains (26) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT26 T:370-408                  Pfam domains (26)
          Pfam domains (27) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT27 T:370-408                  Pfam domains (27)
          Pfam domains (28) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT28 T:370-408                  Pfam domains (28)
          Pfam domains (29) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT29 T:370-408                  Pfam domains (29)
          Pfam domains (30) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT30 T:370-408                  Pfam domains (30)
          Pfam domains (31) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT31 T:370-408                  Pfam domains (31)
          Pfam domains (32) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT32 T:370-408                  Pfam domains (32)
          Pfam domains (33) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT33 T:370-408                  Pfam domains (33)
          Pfam domains (34) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT34 T:370-408                  Pfam domains (34)
          Pfam domains (35) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT35 T:370-408                  Pfam domains (35)
          Pfam domains (36) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT36 T:370-408                  Pfam domains (36)
          Pfam domains (37) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT37 T:370-408                  Pfam domains (37)
          Pfam domains (38) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT38 T:370-408                  Pfam domains (38)
          Pfam domains (39) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT39 T:370-408                  Pfam domains (39)
          Pfam domains (40) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT40 T:370-408                  Pfam domains (40)
          Pfam domains (41) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT41 T:370-408                  Pfam domains (41)
          Pfam domains (42) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT42 T:370-408                  Pfam domains (42)
          Pfam domains (43) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT43 T:370-408                  Pfam domains (43)
          Pfam domains (44) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT44 T:370-408                  Pfam domains (44)
          Pfam domains (45) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT45 T:370-408                  Pfam domains (45)
          Pfam domains (46) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT46 T:370-408                  Pfam domains (46)
          Pfam domains (47) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT47 T:370-408                  Pfam domains (47)
          Pfam domains (48) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT48 T:370-408                  Pfam domains (48)
          Pfam domains (49) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT49 T:370-408                  Pfam domains (49)
          Pfam domains (50) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT50 T:370-408                  Pfam domains (50)
          Pfam domains (51) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT51 T:370-408                  Pfam domains (51)
          Pfam domains (52) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT52 T:370-408                  Pfam domains (52)
          Pfam domains (53) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT53 T:370-408                  Pfam domains (53)
          Pfam domains (54) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT54 T:370-408                  Pfam domains (54)
          Pfam domains (55) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT55 T:370-408                  Pfam domains (55)
          Pfam domains (56) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT56 T:370-408                  Pfam domains (56)
          Pfam domains (57) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT57 T:370-408                  Pfam domains (57)
          Pfam domains (58) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT58 T:370-408                  Pfam domains (58)
          Pfam domains (59) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT59 T:370-408                  Pfam domains (59)
          Pfam domains (60) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT60 T:370-408                  Pfam domains (60)
          Pfam domains (61) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT61 T:370-408                  Pfam domains (61)
          Pfam domains (62) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT62 T:370-408                  Pfam domains (62)
          Pfam domains (63) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT63 T:370-408                  Pfam domains (63)
          Pfam domains (64) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT64 T:370-408                  Pfam domains (64)
          Pfam domains (65) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT65 T:370-408                  Pfam domains (65)
          Pfam domains (66) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT66 T:370-408                  Pfam domains (66)
          Pfam domains (67) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT67 T:370-408                  Pfam domains (67)
          Pfam domains (68) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT68 T:370-408                  Pfam domains (68)
          Pfam domains (69) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT69 T:370-408                  Pfam domains (69)
          Pfam domains (70) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WD40-1vyhT70 T:370-408                  Pfam domains (70)
         Sec.struct. author ..........eeee.....eeeeee.....eeeeee....eeeee.......eee......eeeeee.....eeeeee......eee.....eee........eeeeee.....eeeeee...eeeeee.....eeeeee.....eeeeee.....eeeeee....eeeee.....eeeee...............hhhhhhhhh....-------..ee........eeeee....eeeeee........ee.......eeeee.....eeeee.......eee......eeeeee......eeeee...eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------WD_REPEATS_1   ---------------------------WD_REPEATS_1   -----------------------------------------------------------------------------------------WD_REPEATS_1   ---------------------------------------------------------------------WD_REPEATS_1   PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vyh T  92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE-------GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291        |-      |311       321       331       341       351       361       371       381       391       401       
                                                                                                                                                                                                                                          300     308                                                                                                    

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 20)

Asymmetric Unit

(-) CATH Domains  (1, 10)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 80)

Asymmetric Unit
(-)
Family: WD40 (64)
1aWD40-1vyhT01T:370-408
1bWD40-1vyhT02T:370-408
1cWD40-1vyhT03T:370-408
1dWD40-1vyhT04T:370-408
1eWD40-1vyhT05T:370-408
1fWD40-1vyhT06T:370-408
1gWD40-1vyhT07T:370-408
1hWD40-1vyhT08T:370-408
1iWD40-1vyhT09T:370-408
1jWD40-1vyhT10T:370-408
1kWD40-1vyhT11T:370-408
1lWD40-1vyhT12T:370-408
1mWD40-1vyhT13T:370-408
1nWD40-1vyhT14T:370-408
1oWD40-1vyhT15T:370-408
1pWD40-1vyhT16T:370-408
1qWD40-1vyhT17T:370-408
1rWD40-1vyhT18T:370-408
1sWD40-1vyhT19T:370-408
1tWD40-1vyhT20T:370-408
1uWD40-1vyhT21T:370-408
1vWD40-1vyhT22T:370-408
1wWD40-1vyhT23T:370-408
1xWD40-1vyhT24T:370-408
1yWD40-1vyhT25T:370-408
1zWD40-1vyhT26T:370-408
1aaWD40-1vyhT27T:370-408
1abWD40-1vyhT28T:370-408
1acWD40-1vyhT29T:370-408
1adWD40-1vyhT30T:370-408
1aeWD40-1vyhT31T:370-408
1afWD40-1vyhT32T:370-408
1agWD40-1vyhT33T:370-408
1ahWD40-1vyhT34T:370-408
1aiWD40-1vyhT35T:370-408
1ajWD40-1vyhT36T:370-408
1akWD40-1vyhT37T:370-408
1alWD40-1vyhT38T:370-408
1amWD40-1vyhT39T:370-408
1anWD40-1vyhT40T:370-408
1aoWD40-1vyhT41T:370-408
1apWD40-1vyhT42T:370-408
1aqWD40-1vyhT43T:370-408
1arWD40-1vyhT44T:370-408
1asWD40-1vyhT45T:370-408
1atWD40-1vyhT46T:370-408
1auWD40-1vyhT47T:370-408
1avWD40-1vyhT48T:370-408
1awWD40-1vyhT49T:370-408
1axWD40-1vyhT50T:370-408
1ayWD40-1vyhT51T:370-408
1azWD40-1vyhT52T:370-408
1baWD40-1vyhT53T:370-408
1bbWD40-1vyhT54T:370-408
1bcWD40-1vyhT55T:370-408
1bdWD40-1vyhT56T:370-408
1beWD40-1vyhT57T:370-408
1bfWD40-1vyhT58T:370-408
1bgWD40-1vyhT59T:370-408
1bhWD40-1vyhT60T:370-408
1biWD40-1vyhT61T:370-408
1bjWD40-1vyhT62T:370-408
1bkWD40-1vyhT63T:370-408
1blWD40-1vyhT64T:370-408
1bmWD40-1vyhT65T:370-408
1bnWD40-1vyhT66T:370-408
1boWD40-1vyhT67T:370-408
1bpWD40-1vyhT68T:370-408
1bqWD40-1vyhT69T:370-408
1brWD40-1vyhT70T:370-408

(-) Gene Ontology  (95, 114)

Asymmetric Unit(hide GO term definitions)
Chain A,B,E,F,I,J,M,N,Q,R   (PA1B2_HUMAN | P68402)
molecular function
    GO:0003847    1-alkyl-2-acetylglycerophosphocholine esterase activity    Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0004623    phospholipase A2 activity    Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate.
    GO:0047179    platelet-activating factor acetyltransferase activity    Catalysis of the reaction: 1-radyl-2-acyl-sn-glycero-3-phospholipid + 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-radyl-2-acetyl-sn-glycero-3-phospholipid.
    GO:0046982    protein heterodimerization activity    Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
    GO:0007420    brain development    The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
    GO:0016042    lipid catabolic process    The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0016239    positive regulation of macroautophagy    Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
    GO:0007283    spermatogenesis    The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005730    nucleolus    A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain A,B,E,F,I,J,M,N,Q,R   (PA1B2_BOVIN | P68401)
molecular function
    GO:0003847    1-alkyl-2-acetylglycerophosphocholine esterase activity    Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0047179    platelet-activating factor acetyltransferase activity    Catalysis of the reaction: 1-radyl-2-acyl-sn-glycero-3-phospholipid + 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-radyl-2-acetyl-sn-glycero-3-phospholipid.
biological process
    GO:0007420    brain development    The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
    GO:0016042    lipid catabolic process    The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0016239    positive regulation of macroautophagy    Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
    GO:0007283    spermatogenesis    The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005730    nucleolus    A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain C,D,G,H,K,L,O,P,S,T   (LIS1_MOUSE | P63005)
molecular function
    GO:0045505    dynein intermediate chain binding    Interacting selectively and non-covalently with an intermediate chain of the dynein complex.
    GO:0008017    microtubule binding    Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
    GO:0051219    phosphoprotein binding    Interacting selectively and non-covalently with a phosphorylated protein.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
    GO:0001675    acrosome assembly    The formation of the acrosome from the spermatid Golgi.
    GO:0030036    actin cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0008344    adult locomotory behavior    Locomotory behavior in a fully developed and mature organism.
    GO:0001667    ameboidal-type cell migration    Cell migration that is accomplished by extension and retraction of a pseudopodium.
    GO:0060117    auditory receptor cell development    The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
    GO:0007420    brain development    The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
    GO:0048854    brain morphogenesis    The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
    GO:0007049    cell cycle    The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
    GO:0030154    cell differentiation    The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
    GO:0051301    cell division    The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
    GO:0016477    cell migration    The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. Cell migration is a central process in the development and maintenance of multicellular organisms.
    GO:0021987    cerebral cortex development    The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.
    GO:0021895    cerebral cortex neuron differentiation    The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex.
    GO:0007268    chemical synaptic transmission    The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.
    GO:0090102    cochlea development    The progression of the cochlea over time from its formation to the mature structure. The cochlea is the snail-shaped portion of the inner ear that is responsible for the detection of sound.
    GO:0021540    corpus callosum morphogenesis    The process in which the anatomical structures of the corpus callosum are generated and organized. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres.
    GO:0043622    cortical microtubule organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell.
    GO:0051660    establishment of centrosome localization    The directed movement of the centrosome to a specific location.
    GO:0000132    establishment of mitotic spindle orientation    A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures.
    GO:0042249    establishment of planar polarity of embryonic epithelium    Coordinated organization of groups of cells in the plane of an embryonic epithelium, such that they all orient to similar coordinates.
    GO:0021766    hippocampus development    The progression of the hippocampus over time from its initial formation until its mature state.
    GO:0021819    layer formation in cerebral cortex    The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex.
    GO:0007611    learning or memory    The acquisition and processing of information and/or the storage and retrieval of this information over time.
    GO:0016042    lipid catabolic process    The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0000226    microtubule cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
    GO:0090176    microtubule cytoskeleton organization involved in establishment of planar polarity    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity.
    GO:0031023    microtubule organizing center organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center, a structure from which microtubules grow.
    GO:0007017    microtubule-based process    Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
    GO:0007275    multicellular organism development    The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
    GO:0046329    negative regulation of JNK cascade    Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade.
    GO:0010977    negative regulation of neuron projection development    Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
    GO:0007399    nervous system development    The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state.
    GO:0007405    neuroblast proliferation    The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron.
    GO:0050885    neuromuscular process controlling balance    Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors.
    GO:0001764    neuron migration    The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.
    GO:0051081    nuclear envelope disassembly    The controlled breakdown of the nuclear envelope in the context of a normal process.
    GO:0007097    nuclear migration    The directed movement of the nucleus.
    GO:0036035    osteoclast development    The process whose specific outcome is the progression of a osteoclast from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.
    GO:0045773    positive regulation of axon extension    Any process that activates or increases the frequency, rate or extent of axon extension.
    GO:0051130    positive regulation of cellular component organization    Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
    GO:0001961    positive regulation of cytokine-mediated signaling pathway    Any process that activates or increases the frequency, rate or extent of a cytokine mediated signaling pathway.
    GO:0061003    positive regulation of dendritic spine morphogenesis    Any process that increases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
    GO:0040019    positive regulation of embryonic development    Any process that activates or increases the frequency, rate or extent of embryonic development.
    GO:0045931    positive regulation of mitotic cell cycle    Any process that activates or increases the rate or extent of progression through the mitotic cell cycle.
    GO:0009306    protein secretion    The controlled release of proteins from a cell.
    GO:0043087    regulation of GTPase activity    Any process that modulates the rate of GTP hydrolysis by a GTPase.
    GO:0070507    regulation of microtubule cytoskeleton organization    Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.
    GO:2000574    regulation of microtubule motor activity    Any process that modulates the frequency, rate or extent of microtubule motor activity.
    GO:0008090    retrograde axonal transport    The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons.
    GO:0017145    stem cell division    The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types.
    GO:0019226    transmission of nerve impulse    The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
    GO:0047496    vesicle transport along microtubule    The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
cellular component
    GO:0000235    astral microtubule    Any of the spindle microtubules that radiate in all directions from the spindle poles and are thought to contribute to the forces that separate the poles and position them in relation to the rest of the cell.
    GO:0030424    axon    The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
    GO:1904115    axon cytoplasm    Any cytoplasm that is part of a axon.
    GO:0005938    cell cortex    The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
    GO:0031252    cell leading edge    The area of a motile cell closest to the direction of movement.
    GO:0005813    centrosome    A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0030426    growth cone    The migrating motile tip of a growing nerve cell axon or dendrite.
    GO:0005871    kinesin complex    Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.
    GO:0000776    kinetochore    A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005874    microtubule    Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
    GO:0005875    microtubule associated complex    Any multimeric complex connected to a microtubule.
    GO:0015630    microtubule cytoskeleton    The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins.
    GO:0005815    microtubule organizing center    An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005635    nuclear envelope    The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space).
    GO:0031965    nuclear membrane    Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0048471    perinuclear region of cytoplasm    Cytoplasm situated near, or occurring around, the nucleus.
    GO:0005819    spindle    The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
    GO:0031982    vesicle    Any small, fluid-filled, spherical organelle enclosed by membrane.

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        LIS1_MOUSE | P630051uuj
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(-) Related Entries Specified in the PDB File

1fxw CRYSTAL STRUCTURE OF THE RECOMBINANT ALPHA1/ ALPHA2CATALYTIC HETERODIMER OF BOVINE BRAIN PLATELET-ACTIVATINGFACTOR ACETYLHYDROLASE IB.